Detailed information NTG0380279

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FXO11_RS04350
• Genome accession: NZ_CP043042
• Coordinates: 981984..983366 (-)
• Length: 460 a.a.
• NCBI ID: WP_148861745.1
• Uniprot ID: -
• Organism: Marinobacter fonticola strain CS412
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 976984..988366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FXO11_RS20610	-	980841..981263 (+)	423	WP_148861743.1	type IV pilin protein	-
FXO11_RS04345	-	981276..981839 (-)	564	WP_148861744.1	GspH/FimT family pseudopilin	-
FXO11_RS04350	pilR	981984..983366 (-)	1383	WP_148861745.1	sigma-54 dependent transcriptional regulator	Regulator
FXO11_RS04355	-	983428..985062 (-)	1635	WP_148861746.1	PAS domain-containing sensor histidine kinase	-
FXO11_RS04360	-	985210..986865 (+)	1656	WP_148861747.1	NAD+ synthase	-
FXO11_RS04365	-	986990..987817 (-)	828	WP_148861749.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 460 a.a.
• Molecular weight: 50562.82 Da
• Isoelectric Point: 4.8496

>NTDB_id=380279 FXO11_RS04350 WP_148861745.1 981984..983366(-) (pilR) [Marinobacter fonticola strain CS412]
MTTPTALIIDDEPDIRELLDITLSRMGIDVETAADITSAKQRLEASPPQLCLTDMNLPDGNGIELVHWIQKVCPQTPVAV
ITAYGNMDTAIEALKAGAFDFVSKPVELPRLRELVQSALKLSEPDIEESHADDPGLLLGQSEGVRRLRNQTRKLARSQAP
VFISGESGSGKELVARMIHLQGPRRGGPFVAVNCGAIPSELMESEFFGHKKGSFTGAVDNKAGLFRSADGGTLFLDEVAD
LPLNMQVKLLRAIQEKAVRPVGESKEEPVDIRILSATHRDLPSLVQDGSFRQDLFYRINVIELKVPPLRDRPDDIQLLSR
HILDRLARDYECEPAQLTPAALEKLKDHTFPGNVRELENILERAFTLCDLDQIDVADLHLGSAPIAIGSGTPSDATPPTA
APLDLPEDGELDLENYLESIERKAIEKALEATRWNKTAAAKKLGISFRALRYKLKKLGME

Nucleotide

• Length: 1383 bp

>NTDB_id=380279 FXO11_RS04350 WP_148861745.1 981984..983366(-) (pilR) [Marinobacter fonticola strain CS412]
ATGACGACACCGACGGCGCTGATCATCGACGACGAACCCGATATCCGTGAACTACTGGACATCACGCTGTCGCGAATGGG
CATTGATGTGGAGACCGCCGCCGATATCACCAGCGCAAAGCAGCGACTGGAAGCCAGCCCGCCCCAGCTCTGCCTGACGG
ACATGAACCTACCGGACGGCAACGGTATCGAACTTGTACACTGGATTCAGAAAGTCTGCCCGCAAACGCCCGTAGCTGTG
ATTACTGCCTATGGCAACATGGATACCGCTATCGAGGCGCTAAAAGCCGGTGCCTTCGACTTTGTATCCAAACCGGTGGA
ACTGCCGCGGCTGCGCGAACTGGTGCAAAGCGCCCTCAAGCTTTCCGAGCCCGACATCGAAGAAAGCCACGCCGACGATC
CAGGTCTCCTGCTGGGCCAGTCCGAAGGCGTACGACGCCTACGTAATCAGACCCGCAAACTGGCGCGCAGCCAGGCGCCT
GTATTCATCAGCGGCGAGTCCGGCAGCGGGAAGGAACTCGTCGCCCGCATGATCCACCTCCAAGGCCCCCGCAGAGGCGG
CCCTTTTGTTGCCGTGAATTGCGGCGCCATCCCTTCCGAACTGATGGAGAGTGAATTCTTCGGTCACAAGAAAGGTAGCT
TTACCGGCGCTGTCGATAACAAAGCGGGCCTCTTCCGCTCTGCTGACGGTGGCACGCTCTTTCTCGACGAGGTGGCTGAC
CTGCCGCTAAACATGCAGGTCAAGCTGTTGCGGGCCATTCAGGAGAAAGCGGTGCGTCCGGTAGGCGAGTCCAAAGAGGA
ACCGGTGGATATCCGCATCCTGAGCGCCACGCACCGGGATCTTCCGTCGCTCGTGCAGGACGGCAGCTTCCGCCAGGATC
TCTTCTACCGCATTAACGTCATCGAGTTGAAAGTACCCCCGCTCAGGGATCGTCCTGACGACATCCAATTGCTGTCCCGA
CACATCCTTGATCGACTGGCCCGGGACTATGAATGCGAGCCGGCGCAATTAACACCTGCGGCGCTGGAAAAACTCAAAGA
CCACACCTTCCCCGGCAACGTGCGTGAACTGGAAAATATCCTTGAACGCGCGTTTACGCTGTGCGATCTGGACCAAATCG
ACGTTGCCGATCTGCATCTAGGCAGCGCGCCGATTGCCATTGGCTCCGGGACCCCTTCAGACGCAACTCCGCCGACTGCC
GCACCGCTTGATTTGCCGGAGGACGGCGAGCTGGACCTGGAGAATTATCTGGAATCCATTGAGAGAAAAGCGATTGAGAA
AGCGCTGGAAGCGACCCGGTGGAATAAAACGGCGGCGGCGAAGAAGTTGGGGATTAGTTTTCGGGCTTTGCGGTATAAGT
TGAAGAAGTTGGGGATGGAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (417-457)

• Sigma-54 interaction domain (Sigma54_activat) (137-303)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.557	100	0.637
pilR	Acinetobacter baumannii strain A118	52.043	100	0.526