Detailed information NTG0377951

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: FR729_RS12170
• Genome accession: NZ_CP042449
• Coordinates: 2590877..2591392 (-)
• Length: 171 a.a.
• NCBI ID: WP_167415487.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain FA2
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2585877..2596392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FR729_RS12155 (FR729_12525)	aroB	2587267..2588367 (-)	1101	WP_005382764.1	3-dehydroquinate synthase	-
FR729_RS12160 (FR729_12530)	aroK	2588400..2588918 (-)	519	WP_005381319.1	shikimate kinase AroK	-
FR729_RS12165 (FR729_12535)	pilQ	2589106..2590851 (-)	1746	WP_005382765.1	type IV pilus secretin PilQ	Machinery gene
FR729_RS12170 (FR729_12540)	pilP	2590877..2591392 (-)	516	WP_167415487.1	pilus assembly protein PilP	Machinery gene
FR729_RS12175 (FR729_12545)	pilO	2591382..2591975 (-)	594	WP_005382767.1	type 4a pilus biogenesis protein PilO	Machinery gene
FR729_RS12180 (FR729_12550)	pilN	2591968..2592543 (-)	576	WP_167415488.1	PilN domain-containing protein	Machinery gene
FR729_RS12185 (FR729_12555)	pilM	2592527..2593543 (-)	1017	WP_005382774.1	type IV pilus biogenesis protein PilM	Machinery gene
FR729_RS12190 (FR729_12560)	-	2593688..2596249 (+)	2562	WP_025768081.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 171 a.a.
• Molecular weight: 19095.27 Da
• Isoelectric Point: 10.4342

>NTDB_id=377951 FR729_RS12170 WP_167415487.1 2590877..2591392(-) (pilP) [Vibrio alginolyticus strain FA2]
MTSKSLLLVLMGSLLMGCQANDESLTDFIRGVETQARREVEKLKPADKYVAVTYAPEVQRAPFELPKEATIATQPVARKD
CWQPPSRRRTGKLEKFPLSQLRLKGVMGMDNTVSGLVQAPNSTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR

Nucleotide

• Length: 516 bp

>NTDB_id=377951 FR729_RS12170 WP_167415487.1 2590877..2591392(-) (pilP) [Vibrio alginolyticus strain FA2]
ATGACAAGTAAGTCTTTGTTGCTGGTACTGATGGGTTCTCTATTGATGGGCTGCCAGGCGAATGATGAATCATTGACGGA
TTTTATTCGAGGAGTGGAAACACAGGCGCGTCGAGAGGTCGAGAAGCTTAAGCCCGCAGACAAGTATGTTGCAGTCACGT
ACGCACCGGAAGTACAGCGTGCACCCTTTGAATTACCCAAAGAAGCCACTATCGCGACTCAGCCAGTTGCAAGAAAAGAT
TGTTGGCAACCGCCCTCAAGAAGGCGAACTGGTAAATTAGAAAAATTCCCATTAAGCCAATTACGTTTGAAAGGTGTCAT
GGGCATGGATAACACGGTTTCTGGCCTTGTTCAGGCTCCCAATAGCACCGTCTATAAAGTTAAGCCGGGTCAATACCTCG
GACGCAATAATGGCAAAGTGACCCATGTCAGCCACTCCTACTTGTTGATTAATGAAACGTTGCCCGACGGCTTAGGATGT
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (25-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio campbellii strain DS40M4	84.211	100	0.842
pilP	Vibrio cholerae strain A1552	56.395	100	0.567