Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   HB752_RS05090 Genome accession   NZ_CP050271
Coordinates   1009871..1010305 (-) Length   144 a.a.
NCBI ID   WP_019804751.1    Uniprot ID   -
Organism   Streptococcus mutans strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1004871..1015305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB752_RS05070 (HB752_05070) - 1005173..1005502 (-) 330 Protein_984 hypothetical protein -
  HB752_RS05075 (HB752_05075) tpx 1005639..1006124 (-) 486 WP_002266461.1 thiol peroxidase -
  HB752_RS05080 (HB752_05080) rcrQ 1006321..1008075 (-) 1755 WP_019804753.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05085 (HB752_05085) rcrP 1008065..1009867 (-) 1803 WP_019804752.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05090 (HB752_05090) rcrR 1009871..1010305 (-) 435 WP_019804751.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HB752_RS05095 (HB752_05095) queC 1010858..1011511 (+) 654 WP_019804749.1 7-cyano-7-deazaguanine synthase QueC -
  HB752_RS05100 (HB752_05100) queD 1011511..1011957 (+) 447 WP_002281982.1 6-carboxytetrahydropterin synthase QueD -
  HB752_RS05105 (HB752_05105) queE 1011954..1012670 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  HB752_RS05110 (HB752_05110) queF 1012683..1013171 (+) 489 WP_002263288.1 preQ(1) synthase -
  HB752_RS05115 (HB752_05115) - 1013280..1013663 (+) 384 WP_002298133.1 DUF3021 family protein -
  HB752_RS05120 (HB752_05120) gdhA 1013773..1015122 (-) 1350 WP_019804748.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16719.64 Da        Isoelectric Point: 10.6361

>NTDB_id=377765 HB752_RS05090 WP_019804751.1 1009871..1010305(-) (rcrR) [Streptococcus mutans strain S1]
MKEPFSEFKNLITATERYIQKLSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=377765 HB752_RS05090 WP_019804751.1 1009871..1010305(-) (rcrR) [Streptococcus mutans strain S1]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAAAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

99.306

100

0.993