Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HB752_RS05085 Genome accession   NZ_CP050271
Coordinates   1008065..1009867 (-) Length   600 a.a.
NCBI ID   WP_019804752.1    Uniprot ID   -
Organism   Streptococcus mutans strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1003065..1014867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB752_RS05060 (HB752_05060) - 1003696..1004382 (-) 687 WP_002263646.1 response regulator transcription factor -
  HB752_RS05065 (HB752_05065) - 1004383..1005006 (-) 624 WP_002268771.1 GTP pyrophosphokinase -
  HB752_RS05070 (HB752_05070) - 1005173..1005502 (-) 330 Protein_984 hypothetical protein -
  HB752_RS05075 (HB752_05075) tpx 1005639..1006124 (-) 486 WP_002266461.1 thiol peroxidase -
  HB752_RS05080 (HB752_05080) rcrQ 1006321..1008075 (-) 1755 WP_019804753.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05085 (HB752_05085) rcrP 1008065..1009867 (-) 1803 WP_019804752.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05090 (HB752_05090) rcrR 1009871..1010305 (-) 435 WP_019804751.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HB752_RS05095 (HB752_05095) queC 1010858..1011511 (+) 654 WP_019804749.1 7-cyano-7-deazaguanine synthase QueC -
  HB752_RS05100 (HB752_05100) queD 1011511..1011957 (+) 447 WP_002281982.1 6-carboxytetrahydropterin synthase QueD -
  HB752_RS05105 (HB752_05105) queE 1011954..1012670 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  HB752_RS05110 (HB752_05110) queF 1012683..1013171 (+) 489 WP_002263288.1 preQ(1) synthase -
  HB752_RS05115 (HB752_05115) - 1013280..1013663 (+) 384 WP_002298133.1 DUF3021 family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66953.79 Da        Isoelectric Point: 9.6602

>NTDB_id=377764 HB752_RS05085 WP_019804752.1 1008065..1009867(-) (rcrP) [Streptococcus mutans strain S1]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKSLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSVTAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGEIVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQNYSHDDLNNKVGYIPQRAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKDFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=377764 HB752_RS05085 WP_019804752.1 1008065..1009867(-) (rcrP) [Streptococcus mutans strain S1]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAACCGAGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCTGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAGCCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGTGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGATAGTTGCTTTTATTGGCTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGCATCAAAGTGCAAAATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAGGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAATTAGCCCAAGCCAAAGATTTTGTTGAAGAAAAAGAAAAGGGA
CTTGATACTGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAACGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGAAATGACTAAGTTGATTGTAGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTG
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.333

100

0.993