Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HB752_RS05080 Genome accession   NZ_CP050271
Coordinates   1006321..1008075 (-) Length   584 a.a.
NCBI ID   WP_019804753.1    Uniprot ID   -
Organism   Streptococcus mutans strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1001321..1013075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB752_RS05050 (HB752_05050) - 1002051..1002401 (+) 351 WP_002263648.1 DUF1304 family protein -
  HB752_RS05055 (HB752_05055) - 1002458..1003690 (-) 1233 WP_002287513.1 HAMP domain-containing sensor histidine kinase -
  HB752_RS05060 (HB752_05060) - 1003696..1004382 (-) 687 WP_002263646.1 response regulator transcription factor -
  HB752_RS05065 (HB752_05065) - 1004383..1005006 (-) 624 WP_002268771.1 GTP pyrophosphokinase -
  HB752_RS05070 (HB752_05070) - 1005173..1005502 (-) 330 Protein_984 hypothetical protein -
  HB752_RS05075 (HB752_05075) tpx 1005639..1006124 (-) 486 WP_002266461.1 thiol peroxidase -
  HB752_RS05080 (HB752_05080) rcrQ 1006321..1008075 (-) 1755 WP_019804753.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05085 (HB752_05085) rcrP 1008065..1009867 (-) 1803 WP_019804752.1 ABC transporter ATP-binding protein Regulator
  HB752_RS05090 (HB752_05090) rcrR 1009871..1010305 (-) 435 WP_019804751.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HB752_RS05095 (HB752_05095) queC 1010858..1011511 (+) 654 WP_019804749.1 7-cyano-7-deazaguanine synthase QueC -
  HB752_RS05100 (HB752_05100) queD 1011511..1011957 (+) 447 WP_002281982.1 6-carboxytetrahydropterin synthase QueD -
  HB752_RS05105 (HB752_05105) queE 1011954..1012670 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64591.65 Da        Isoelectric Point: 5.9209

>NTDB_id=377763 HB752_RS05080 WP_019804753.1 1006321..1008075(-) (rcrQ) [Streptococcus mutans strain S1]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVVSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKIKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTREEVHDAFAMVLQDTWLFEGTVKENLIYNRKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=377763 HB752_RS05080 WP_019804753.1 1006321..1008075(-) (rcrQ) [Streptococcus mutans strain S1]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGGTATCCACTGTTATCATGGC
CAAGAGTCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCTGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAATTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAGAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCGAAAACATATTACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATCCTTGTTATGAAAGATGGCAATATCATCGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-297)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

99.144

100

0.991