Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   HB752_RS00990 Genome accession   NZ_CP050271
Coordinates   200119..202134 (+) Length   671 a.a.
NCBI ID   WP_019804891.1    Uniprot ID   -
Organism   Streptococcus mutans strain S1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 195119..207134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB752_RS00970 (HB752_00970) - 196234..197265 (+) 1032 WP_002311768.1 3-deoxy-7-phosphoheptulonate synthase -
  HB752_RS00975 (HB752_00975) - 197267..198301 (+) 1035 WP_002310583.1 3-deoxy-7-phosphoheptulonate synthase -
  HB752_RS00980 (HB752_00980) acpS 198475..198834 (+) 360 WP_002263463.1 holo-ACP synthase -
  HB752_RS00985 (HB752_00985) alr 198831..199946 (+) 1116 WP_002309466.1 alanine racemase -
  HB752_RS00990 (HB752_00990) recG/mmsA 200119..202134 (+) 2016 WP_019804891.1 ATP-dependent DNA helicase RecG Machinery gene
  HB752_RS00995 (HB752_00995) - 202277..202441 (-) 165 WP_002263466.1 hypothetical protein -
  HB752_RS01000 (HB752_01000) - 202467..203426 (-) 960 WP_019316589.1 asparaginase -
  HB752_RS01005 (HB752_01005) - 203499..204884 (+) 1386 WP_002274741.1 Cof-type HAD-IIB family hydrolase -
  HB752_RS01010 (HB752_01010) - 205162..205611 (-) 450 WP_002263469.1 universal stress protein -
  HB752_RS01015 (HB752_01015) - 205709..206245 (-) 537 WP_019323357.1 biotin transporter BioY -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75262.11 Da        Isoelectric Point: 7.6470

>NTDB_id=377728 HB752_RS00990 WP_019804891.1 200119..202134(+) (recG/mmsA) [Streptococcus mutans strain S1]
MDLQSSLAVLKGLGPKSAEKFHKLGIYTIEDLLLYYPFRYEDFKAKSVLDLLDGEKAVVTGKVVTPANVQYYGFKRNRLS
FKIKQDEAVIAVSFFNQPYLQDKVELDQDIAIFGKWDQKKSALTGMKILAQVTDDMQPVYHVAQGISQSALIKAIQSAFE
AGYLRFLSENLPQVLLNKYRLLDRQTATRAMHFPKDLEEYKQALRRIKFEELFYFQLNLQVLKANNKSESNGLLITYDHD
QVAAKIAALPFALTNAQKRSLDEILADMESGAHMNRLLQGDVGSGKTVIASLAMYAAYSAGLQSALMVPTEILAEQHYES
LRTLFPELSIALLTSGMKAAVRRSALAAIADGSVDMIVGTHALIQEGVDYHKLGLVITDEQHRFGVKQRRLFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSLIDELPAGRKPIVTRWVKHEQLDKVLPWVKEQLKKKAQVYVISPLIEESETLDLKN
AVALEEDLKAYFASSANIALMHGRMKNDEKEAIMQAFKKGSIDILVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGEKQSYTILVANPKTDTGKNRMRIMTKTTDGFVLAEEDLKMRGSGEIFGVRQSGIPEFQVADIVEDYPILEEARK
VASQIVAVKDWCQDKRWAILVQNLKQKEILD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=377728 HB752_RS00990 WP_019804891.1 200119..202134(+) (recG/mmsA) [Streptococcus mutans strain S1]
ATGGACTTACAGTCATCACTTGCGGTTTTAAAGGGATTAGGTCCTAAGTCTGCAGAAAAATTTCATAAATTAGGTATTTA
TACCATTGAGGATTTGTTGCTTTACTATCCTTTTCGTTATGAGGATTTTAAGGCAAAATCTGTTTTAGATTTGTTAGATG
GTGAAAAAGCTGTTGTGACTGGAAAAGTAGTGACACCAGCTAATGTACAATATTATGGGTTTAAACGTAATCGCCTATCT
TTTAAAATAAAACAAGATGAAGCTGTTATTGCTGTTTCTTTTTTTAATCAGCCTTATTTACAAGATAAGGTGGAGCTTGA
TCAGGATATTGCTATTTTTGGAAAATGGGATCAAAAGAAGTCAGCTCTTACGGGCATGAAGATTTTGGCTCAAGTGACAG
ATGATATGCAGCCGGTTTATCATGTGGCACAAGGAATATCACAGTCAGCTCTGATTAAGGCTATTCAATCCGCTTTTGAA
GCTGGTTATTTACGCTTTTTATCTGAAAATTTACCGCAGGTTTTGCTTAATAAATATCGTTTGTTAGATAGACAAACAGC
TACGCGGGCTATGCATTTTCCGAAAGATTTGGAAGAATATAAACAAGCCTTGCGCCGCATCAAATTTGAGGAACTCTTTT
ATTTTCAACTCAATTTGCAGGTTCTTAAAGCAAATAATAAATCAGAATCAAATGGTCTGCTTATTACTTATGATCACGAT
CAAGTGGCTGCTAAAATAGCTGCTCTGCCTTTTGCCTTGACGAATGCCCAAAAAAGGAGCTTAGACGAAATTCTGGCAGA
TATGGAGTCTGGCGCTCATATGAATCGGCTTTTACAGGGAGATGTCGGTTCTGGTAAGACAGTCATTGCCAGTCTTGCTA
TGTATGCAGCCTATAGTGCAGGTCTGCAGTCTGCTTTGATGGTTCCTACGGAAATTTTAGCGGAACAACATTATGAAAGT
TTAAGGACTTTATTTCCTGAACTTTCAATTGCACTTTTGACGTCTGGAATGAAGGCTGCTGTAAGACGTTCAGCCTTAGC
AGCTATCGCTGATGGCTCAGTAGATATGATTGTTGGTACCCACGCTCTCATTCAAGAAGGTGTTGATTACCATAAATTAG
GCTTAGTTATTACGGATGAACAACATCGATTTGGTGTTAAGCAAAGGCGACTGTTTAGGGAAAAGGGAGAGAATCCTGAT
GTTCTCATGATGACAGCCACACCTATTCCTAGAACCTTGGCTATTACTGCCTTTGGCGAAATGGATGTTTCTCTTATTGA
TGAATTGCCAGCAGGTCGCAAACCGATTGTTACACGTTGGGTTAAGCATGAACAGTTAGATAAAGTTCTGCCTTGGGTTA
AAGAACAGCTCAAGAAAAAGGCACAAGTCTATGTCATTTCACCTTTGATTGAGGAGTCTGAAACCTTGGATTTGAAAAAT
GCTGTCGCTTTAGAAGAAGACTTAAAAGCTTATTTTGCGTCGTCTGCTAATATTGCTCTTATGCATGGTCGTATGAAAAA
TGATGAAAAAGAAGCCATTATGCAGGCTTTCAAAAAGGGCAGTATTGATATTCTGGTTTCAACAACTGTCATTGAAGTTG
GGGTCAATGTACCTAATGCTACGATTATGATTATTATGGATGCCGATCGTTTTGGTCTTAGTCAATTGCATCAATTACGA
GGACGTGTAGGACGTGGAGAAAAGCAATCCTATACCATTTTAGTTGCTAATCCTAAAACGGATACTGGGAAAAATCGCAT
GCGCATTATGACAAAAACAACAGATGGCTTTGTTTTGGCTGAAGAAGATTTAAAAATGCGTGGTTCAGGAGAAATTTTTG
GTGTTCGTCAATCTGGCATTCCTGAATTTCAGGTGGCTGATATTGTGGAAGATTACCCTATTTTAGAAGAGGCTAGAAAA
GTGGCTAGTCAAATTGTGGCCGTTAAAGATTGGTGTCAAGATAAACGATGGGCAATTCTTGTGCAAAATCTTAAGCAAAA
AGAAATTTTGGATTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)

DEAD/DEAH box helicase (DEAD)

(254-409)

RecG wedge domain (RecG_wedge)

(10-157)

Helicase conserved C-terminal domain (Helicase_C)

(455-566)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

69.598

100

0.696
  recG/mmsA Streptococcus pneumoniae R36A

69.598

100

0.696
  recG Bacillus subtilis subsp. subtilis str. 168

49.629

100

0.498
  recG Neisseria meningitidis strain C311

39.816

97.317

0.387

Multiple sequence alignment