Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FGL90_RS08865 Genome accession   NZ_CP042371
Coordinates   1799504..1800778 (+) Length   424 a.a.
NCBI ID   WP_147657737.1    Uniprot ID   -
Organism   Secundilactobacillus malefermentans strain CBA3618     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1794504..1805778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL90_RS08835 (FGL90_08835) tsf 1795041..1795919 (+) 879 WP_187240418.1 translation elongation factor Ts -
  FGL90_RS08840 (FGL90_08840) pyrH 1796062..1796784 (+) 723 WP_010619709.1 UMP kinase -
  FGL90_RS08845 (FGL90_08845) frr 1796786..1797343 (+) 558 WP_010619710.1 ribosome recycling factor -
  FGL90_RS08850 (FGL90_08850) - 1797368..1797790 (+) 423 WP_147657733.1 hypothetical protein -
  FGL90_RS08855 (FGL90_08855) - 1797854..1798624 (+) 771 WP_147657735.1 isoprenyl transferase -
  FGL90_RS08860 (FGL90_08860) - 1798637..1799425 (+) 789 WP_010619713.1 phosphatidate cytidylyltransferase -
  FGL90_RS08865 (FGL90_08865) eeP 1799504..1800778 (+) 1275 WP_147657737.1 RIP metalloprotease RseP Regulator
  FGL90_RS08870 (FGL90_08870) - 1800812..1802518 (+) 1707 WP_147657739.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 46041.18 Da        Isoelectric Point: 7.0791

>NTDB_id=377491 FGL90_RS08865 WP_147657737.1 1799504..1800778(+) (eeP) [Secundilactobacillus malefermentans strain CBA3618]
MITTIITFIIVFGILVIVHEFGHFYFAKRSGILVREFSVGMGPKLFNHRANGTTYTIRLLPLGGYVRMAGSEEDEGDELK
PGTPVSLYVGKSGKVERINASKKSTLFNGIPLEVSATDLEEALWIEGFENGNEDELKRYNVDHDATIIESDGTEVQIAPK
DVQFQSATLGHRLMTNFAGPMNNFILAIIVFTMFSFALGGVPSNGNQVKVNDATPIARDAGIKSGDKIVAVNGKSTKTWS
KLAAEIQKQGGKKTDLTISRDGKRQAIQLTPKKETESGNTVGVIGITRYMETDIGSILISGFTQTWSMAVALFGALWNMV
SGHFSLNDLGGPVAIFATTSQATQGGLSGVLYFLAFLSLNLGIVNLLPIPALDGGKILLNFIEGIRRKPLSQNVETAITL
VGVAFLLLLMVLVTWNDIERYFIK

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=377491 FGL90_RS08865 WP_147657737.1 1799504..1800778(+) (eeP) [Secundilactobacillus malefermentans strain CBA3618]
GTGATAACAACCATCATAACTTTTATTATTGTTTTTGGTATTTTGGTCATTGTGCACGAATTTGGCCATTTTTACTTTGC
AAAAAGGTCGGGTATTCTGGTTCGAGAATTCTCTGTTGGAATGGGACCAAAGCTGTTTAATCACCGAGCAAATGGAACGA
CTTACACGATTCGTTTATTACCACTGGGTGGATACGTTCGAATGGCTGGAAGCGAAGAGGACGAGGGCGATGAGTTAAAG
CCTGGGACTCCCGTTAGCCTTTACGTTGGAAAATCAGGCAAGGTTGAACGTATTAATGCTAGTAAGAAATCTACATTGTT
TAATGGGATTCCACTGGAAGTATCTGCAACTGATCTTGAGGAAGCGCTTTGGATTGAAGGATTTGAAAACGGCAACGAGG
ATGAACTGAAGCGATACAACGTTGATCATGATGCAACAATTATTGAATCCGATGGTACTGAAGTCCAAATTGCACCTAAG
GATGTTCAATTCCAATCAGCGACGCTTGGTCATCGATTAATGACTAACTTTGCAGGACCAATGAATAATTTTATTTTGGC
AATCATTGTTTTTACAATGTTTTCGTTTGCTCTGGGGGGAGTTCCCTCCAATGGAAACCAGGTAAAGGTTAATGATGCAA
CACCAATTGCCAGAGATGCAGGAATAAAATCTGGTGATAAGATTGTTGCAGTTAACGGTAAAAGCACAAAAACCTGGAGT
AAACTGGCTGCTGAAATTCAAAAACAAGGTGGCAAGAAAACTGATTTGACGATTTCTCGCGATGGCAAACGCCAAGCAAT
TCAGCTAACGCCAAAGAAGGAAACTGAATCAGGGAATACGGTCGGCGTAATTGGAATTACTAGATATATGGAGACGGATA
TAGGGAGTATTCTTATTTCTGGATTCACACAAACTTGGAGCATGGCGGTGGCCTTATTTGGGGCACTTTGGAACATGGTC
TCAGGGCACTTTAGTTTAAATGATCTTGGTGGGCCGGTGGCTATATTTGCCACGACCTCGCAAGCAACTCAAGGTGGCCT
ATCTGGTGTTCTATATTTCTTGGCATTTTTATCATTAAACCTTGGAATTGTAAATTTATTACCAATACCTGCCTTAGATG
GTGGTAAAATATTATTGAACTTTATTGAAGGTATTCGAAGAAAACCACTTTCACAAAATGTCGAAACGGCAATTACCCTG
GTAGGGGTTGCGTTTTTACTTTTATTAATGGTGTTAGTAACTTGGAATGATATAGAGCGGTATTTTATAAAATAA

Domains


Predicted by InterproScan.

(216-260)

(7-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.061

100

0.493

  eeP Streptococcus thermophilus LMD-9

48.826

100

0.491


Multiple sequence alignment