Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FR838_RS06895 Genome accession   NZ_CP042364
Coordinates   1458283..1458666 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain C54     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1453283..1463666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FR838_RS06880 (FR838_06880) pilJ 1455180..1457258 (-) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  FR838_RS06885 (FR838_06885) pilI 1457301..1457837 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  FR838_RS06890 (FR838_06890) pilH 1457898..1458260 (-) 363 WP_002116220.1 response regulator -
  FR838_RS06895 (FR838_06895) pilG 1458283..1458666 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  FR838_RS06900 (FR838_06900) - 1458951..1459589 (+) 639 WP_005072790.1 hypothetical protein -
  FR838_RS06905 (FR838_06905) nolF 1459659..1460768 (+) 1110 WP_078210303.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=377426 FR838_RS06895 WP_000389061.1 1458283..1458666(-) (pilG) [Acinetobacter pittii strain C54]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=377426 FR838_RS06895 WP_000389061.1 1458283..1458666(-) (pilG) [Acinetobacter pittii strain C54]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCGGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment