Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FR838_RS06875 Genome accession   NZ_CP042364
Coordinates   1450527..1455032 (-) Length   1501 a.a.
NCBI ID   WP_002116497.1    Uniprot ID   A0A009N4Y1
Organism   Acinetobacter pittii strain C54     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1445527..1460032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FR838_RS06845 (FR838_06845) elsL 1446487..1446990 (-) 504 WP_002116462.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  FR838_RS06850 (FR838_06850) - 1447142..1447510 (-) 369 WP_002116111.1 YbaN family protein -
  FR838_RS06855 (FR838_06855) - 1447614..1448495 (+) 882 WP_005072800.1 DUF1853 family protein -
  FR838_RS06860 (FR838_06860) - 1448619..1448762 (+) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  FR838_RS06865 (FR838_06865) dapE 1448889..1450025 (+) 1137 WP_005072799.1 succinyl-diaminopimelate desuccinylase -
  FR838_RS06870 (FR838_06870) - 1450060..1450527 (-) 468 WP_002116250.1 hypothetical protein -
  FR838_RS06875 (FR838_06875) chpA 1450527..1455032 (-) 4506 WP_002116497.1 hybrid sensor histidine kinase/response regulator Regulator
  FR838_RS06880 (FR838_06880) pilJ 1455180..1457258 (-) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  FR838_RS06885 (FR838_06885) pilI 1457301..1457837 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  FR838_RS06890 (FR838_06890) pilH 1457898..1458260 (-) 363 WP_002116220.1 response regulator -
  FR838_RS06895 (FR838_06895) pilG 1458283..1458666 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  FR838_RS06900 (FR838_06900) - 1458951..1459589 (+) 639 WP_005072790.1 hypothetical protein -

Sequence

Protein


Download         Length: 1501 a.a.        Molecular weight: 171503.10 Da        Isoelectric Point: 4.4536

>NTDB_id=377425 FR838_RS06875 WP_002116497.1 1450527..1455032(-) (chpA) [Acinetobacter pittii strain C54]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPDIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLEANDLEPESTEVLTILTPEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFEASTKVEHLFKILLQEELSSHSEEVSLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLFNA
EVEQTANEPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEAGELLEGMDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLIVSSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTEPETYVIPELNFEVLQQEAINNTALNLSELTSASEQIAKSNNQLVEQTELQVLYADHDHTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIERAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTTLNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAKKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSEQELFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANKGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SLNETIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDIPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTFEGRLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=377425 FR838_RS06875 WP_002116497.1 1450527..1455032(-) (chpA) [Acinetobacter pittii strain C54]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGATGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGGGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTGGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTCCTGACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAGCGAATGACTTAGAACCAGAATCTACAGAAGTTTTAACTATTTT
GACTCCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGAAGCTAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAGTTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTGGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGATTATATTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCTGCGGGACAAAGAGTAAGTATCATCGAGCAACACCAAAATGTCTTGGATGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCATTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACGGCGAATGAACCTCTCATAGAAAATGTATTCACTGATCAGGTCACCATAGGACAGAGTGTACAACT
AGATCGACAGTTTATTTCGTCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
GTGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGATAGTTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAACCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAACCTCAGTGAGTTAACTTCTGCTTCTGAGCAGATTGCTAAGT
CTAATAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACGATCATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCACTTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGAGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGCTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAAGAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGTGAATTGGAAACCCAAATTATTGCAAAGCACGGTATTGAGAAC
TCACGTTATACGGAATTTGATCCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTATTGCCTCGTCTGCAAAGA
ATTGTGAGGCAGACTTCTACCACGTTAAATCGACCAGCGGAGCTTTTTGTTAATAATACAGAAGGCGAGCTGGACCGGAC
AATGTTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGATTAGAAGACCGTGCGCAAC
GTGAACAAGCTAAAAAACCAGAAACTGGACGCATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGATGATGGGCAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAGCAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCCGATCAAGTCACTCAGATTTCAGGCC
GTGGCGTCGGACTGGATGTCGTGCAAAGTGATATTAAGGCCTTAGGTGGCCATGTGAGTGTCGACTCTGTATACGGGCAG
GGAACTGTCTTTACCATACGTGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCACTGGCGCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGAACAAG
AGCTCTTTGAATTTGAAAATAAGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAAAGGACAAACCGTCGCCTTATTAGTTGACCAACT
GATTGGCTCACGCGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCGCCGACATAAA
TCGCTTAATGAAACTATCTATAGACAACGCGAGTCTGATGAGCGACGTCTTATCATGATTGTAGATGACTCGGTAACTGT
ACGTAAGGTGACGTCTCGCTTACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTTGATGCGATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCACGAATGGATGGCTTTGAGGTACTTAATCTC
GTTCGACATCATGATCTACATCAAGATATACCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTGAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATTTGAAGGGAGACTTGCCTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1378-1489)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1074-1210)

Hpt domain (Hpt)

(202-284)

Hpt domain (Hpt)

(524-606)

Hpt domain (Hpt)

(25-109)

Hpt domain (Hpt)

(728-792)

CheW-like domain (CheW)

(1217-1352)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.947

100

0.805

Multiple sequence alignment