Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   AOLE_RS16575 Genome accession   NC_014259
Coordinates   3523592..3523996 (-) Length   134 a.a.
NCBI ID   WP_013198932.1    Uniprot ID   A0AAN0PB68
Organism   Acinetobacter oleivorans DR1     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3518592..3528996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOLE_RS16545 (AOLE_16520) - 3518674..3518943 (-) 270 WP_013198928.1 HPr family phosphocarrier protein -
  AOLE_RS16550 (AOLE_16525) rapZ 3518940..3519791 (-) 852 WP_004794551.1 RNase adapter RapZ -
  AOLE_RS16555 (AOLE_16530) panC 3519816..3520664 (-) 849 WP_013198929.1 pantoate--beta-alanine ligase -
  AOLE_RS16560 (AOLE_16535) panB 3520668..3521477 (-) 810 WP_004794557.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  AOLE_RS16565 (AOLE_16540) folK 3521524..3522006 (-) 483 WP_013198930.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  AOLE_RS16570 (AOLE_16545) pcnB 3522003..3523466 (-) 1464 WP_013198931.1 polynucleotide adenylyltransferase PcnB -
  AOLE_RS16575 (AOLE_16550) comEA 3523592..3523996 (-) 405 WP_013198932.1 ComEA family DNA-binding protein Machinery gene
  AOLE_RS16580 (AOLE_16555) mazG 3523965..3524771 (-) 807 WP_013198933.1 nucleoside triphosphate pyrophosphohydrolase -
  AOLE_RS16585 (AOLE_16560) - 3524884..3525657 (+) 774 WP_013198934.1 SDR family oxidoreductase -
  AOLE_RS16590 (AOLE_16565) - 3525705..3528011 (-) 2307 WP_005302395.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 15346.66 Da        Isoelectric Point: 10.5146

>NTDB_id=37692 AOLE_RS16575 WP_013198932.1 3523592..3523996(-) (comEA) [Acinetobacter oleivorans DR1]
MHLSMNLWKSKSYIFIILFWSLISSSFVQAQSFDQNFKEWKAKQQMYDQKLSMQRASHSSVPKSSAMTDSSGQVHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKARLTL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=37692 AOLE_RS16575 WP_013198932.1 3523592..3523996(-) (comEA) [Acinetobacter oleivorans DR1]
ATGCATCTCAGCATGAATCTTTGGAAGAGTAAGTCTTATATTTTTATTATTTTATTTTGGAGCCTGATTTCTTCAAGCTT
TGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGATGTATGATCAGAAGTTGAGCATGC
AACGCGCCTCGCATTCTAGCGTTCCAAAAAGCTCAGCCATGACTGACTCTTCGGGACAAGTTCACTTGAATCAAGCCAAT
ATTGATGAGCTTCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGCATTGGTCCAGCCATTTTTGAAAAGAATAAAGCGCGTTTGACTT
TATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(71-133)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

66.423

100

0.679
  comEA Acinetobacter baumannii D1279779

66.423

100

0.679
  comEA Acinetobacter baylyi ADP1

44.355

92.537

0.41

Multiple sequence alignment