Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   AOLE_RS13530 Genome accession   NC_014259
Coordinates   2880385..2881092 (+) Length   235 a.a.
NCBI ID   WP_004793675.1    Uniprot ID   A0AAJ1PDR6
Organism   Acinetobacter oleivorans DR1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2875385..2886092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOLE_RS13515 (AOLE_13505) - 2878197..2879006 (+) 810 WP_013198494.1 M23 family metallopeptidase -
  AOLE_RS13520 (AOLE_13510) - 2879003..2879428 (-) 426 WP_013198495.1 GNAT family N-acetyltransferase -
  AOLE_RS13525 (AOLE_13515) - 2879523..2879945 (-) 423 WP_005041936.1 OsmC family protein -
  AOLE_RS20765 - 2880081..2880143 (-) 63 Protein_2689 hypothetical protein -
  AOLE_RS13530 (AOLE_13520) crp 2880385..2881092 (+) 708 WP_004793675.1 cAMP-activated global transcriptional regulator CRP Regulator
  AOLE_RS13535 (AOLE_13525) - 2881252..2882301 (+) 1050 WP_013198496.1 NADP(H)-dependent aldo-keto reductase -
  AOLE_RS13540 (AOLE_13530) - 2882357..2883136 (-) 780 WP_013198497.1 M48 family metallopeptidase -
  AOLE_RS13545 (AOLE_13535) - 2883252..2883569 (-) 318 WP_013198498.1 hypothetical protein -
  AOLE_RS13550 (AOLE_13540) - 2883689..2885008 (-) 1320 WP_013198499.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26521.16 Da        Isoelectric Point: 4.6625

>NTDB_id=37688 AOLE_RS13530 WP_004793675.1 2880385..2881092(+) (crp) [Acinetobacter oleivorans DR1]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDVSLEEAPVSDEDYDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=37688 AOLE_RS13530 WP_004793675.1 2880385..2881092(+) (crp) [Acinetobacter oleivorans DR1]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCGAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGATGACGAACGTGAAATTGTTGTTGCGTATTTGAATCCGGGCGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACTCGTGATGTCTGTGAAATTGCAGA
AATTTCTTATGACAACTTCCACGAACTTAGCAAACAATATCCGGACTTAAGTTATGCTGTTTTTGCACAACTTGTTCGCC
GTCTAAAAAATACAACTCGTAAAATGACAGATCTTGCGTTTATTGATGTGTCTGGCCGTATTGCACGTTGTTTAATTGAC
TTATCTTCACAGCCAGAAGCAATGATTTTGCCAAACGGTCGTCAAATTCGTATTACACGTCAAGAAATTGGCCGTATTGT
GGGATGTTCACGTGAGATGGTTGGCCGTGTACTTAAGACCTTAGAAGATCAAGGCATGATACAGACAGATGGTAAAGCTA
TTCTTATTTTTGATGTTTCATTAGAAGAAGCACCTGTTTCTGATGAAGACTATGATGATGAAGAATAA

Domains

Predicted by InterproScan.

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-219)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

98.298

100

0.983
  crp Vibrio cholerae strain A1552

47.317

87.234

0.413
  crp Haemophilus influenzae Rd KW20

48.705

82.128

0.4

Multiple sequence alignment