Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AOLE_RS03240 Genome accession   NC_014259
Coordinates   672133..672516 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter oleivorans DR1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 667133..677516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOLE_RS03230 (AOLE_03135) - 670034..671143 (-) 1110 WP_081399256.1 efflux RND transporter periplasmic adaptor subunit -
  AOLE_RS03235 (AOLE_03140) - 671212..671847 (-) 636 WP_013196908.1 hypothetical protein -
  AOLE_RS03240 (AOLE_03145) pilG 672133..672516 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AOLE_RS03245 (AOLE_03150) - 672540..672902 (+) 363 WP_004789266.1 PleD family two-component system response regulator -
  AOLE_RS03250 (AOLE_03155) - 672962..673498 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  AOLE_RS03255 (AOLE_03160) - 673542..675623 (+) 2082 WP_013196909.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=37679 AOLE_RS03240 WP_000389061.1 672133..672516(+) (pilG) [Acinetobacter oleivorans DR1]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=37679 AOLE_RS03240 WP_000389061.1 672133..672516(+) (pilG) [Acinetobacter oleivorans DR1]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTAATTGATGACTCAAAAACCATTCGCCGAACAGCCGAAACTTTATT
ACAGCGAGAAGGCTGTGAAGTCATTACTGCGGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAGGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGCGCTTTGATTAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGCAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGACGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment