Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   FPV14_RS08655 Genome accession   NZ_CP042286
Coordinates   1830248..1832449 (-) Length   733 a.a.
NCBI ID   WP_047556778.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain B3-25B     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1825248..1837449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPV14_RS08635 (FPV14_08635) hemW 1825419..1826543 (-) 1125 WP_000216825.1 radical SAM family heme chaperone HemW -
  FPV14_RS08640 (FPV14_08640) lepA 1826747..1828570 (-) 1824 WP_000356945.1 translation elongation factor 4 -
  FPV14_RS08645 (FPV14_08645) rpsT 1828916..1829167 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  FPV14_RS08650 (FPV14_08650) holA 1829217..1830191 (-) 975 WP_001282558.1 DNA polymerase III subunit delta -
  FPV14_RS08655 (FPV14_08655) comEC 1830248..1832449 (-) 2202 WP_047556778.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  FPV14_RS08660 (FPV14_08660) - 1832454..1832915 (-) 462 WP_000439693.1 ComE operon protein 2 -
  FPV14_RS08665 (FPV14_08665) comEA 1833007..1833708 (-) 702 WP_072467210.1 ComEA family DNA-binding protein Machinery gene
  FPV14_RS08670 (FPV14_08670) - 1833748..1834464 (-) 717 WP_047556478.1 class I SAM-dependent methyltransferase -
  FPV14_RS08675 (FPV14_08675) rsfS 1834467..1834820 (-) 354 WP_001088023.1 ribosome silencing factor -
  FPV14_RS08680 (FPV14_08680) yqeK 1834821..1835405 (-) 585 WP_047556476.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  FPV14_RS08685 (FPV14_08685) - 1835395..1835964 (-) 570 WP_000725169.1 nicotinate-nucleotide adenylyltransferase -
  FPV14_RS08690 (FPV14_08690) yhbY 1835967..1836257 (-) 291 WP_000955238.1 ribosome assembly RNA-binding protein YhbY -
  FPV14_RS08695 (FPV14_08695) aroE 1836262..1837068 (-) 807 WP_047526766.1 shikimate dehydrogenase -

Sequence

Protein


Download         Length: 733 a.a.        Molecular weight: 85000.03 Da        Isoelectric Point: 10.0511

>NTDB_id=376629 FPV14_RS08655 WP_047556778.1 1830248..1832449(-) (comEC) [Staphylococcus argenteus strain B3-25B]
MLYVALSMIVGVLWNSSKVLSTFLFILLLFIAYRKNKIVYAPIALFLIIFSSWYLHYSQQAVFNYINYIERNPQFNERAQ
VIQIQRQDSDTYKGRLSLKNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLKSNQSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNFPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFTFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYFVDLSFNFH
DWLLDLFTRIKQSHFSIPKFNDWIFIMFIISVYYIFWLLAKRKYRLVTFWTIIIMTLLITYPTNSHHKITMLNVGQGDSI
LYEGGKNQNVLIDTGGKVINDTKQPSFSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKG
YSSKTLLLLSKLSHKYNIKLMDVRQISSFKLGDSSFQFFDSFIPNSRDKNEYSIITMITYQNKKALLMGDASKNNESLLL
KKYNLPEIDILKVGHHGSKTSSSKEFIEVIRPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQNGEVTIDLDENL
KVDSNSYGNASGL

Nucleotide


Download         Length: 2202 bp        

>NTDB_id=376629 FPV14_RS08655 WP_047556778.1 1830248..1832449(-) (comEC) [Staphylococcus argenteus strain B3-25B]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTTTATTGCTTATCGTAAAAATAAAATAGTTTATGCTCCTATTGCTCTCTTTTTAATCATTTTTTCCTCATGGT
ATTTACATTATTCACAACAAGCAGTATTTAATTATATCAATTATATTGAACGTAATCCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGATAGTGACACATATAAAGGTAGGTTGAGTTTAAAGAATGAAATATATCCTTTCTTTTT
AACAGATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ACAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGTCTAAAATCGAACCAGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCAGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTAAGTGGCTCGC
ATATAGCTGCAATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTTCCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTGTTTGCTCAATACACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACACTAGT
ACTACTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTACTTTTATAATTATGTTTATTTTGAATC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACTTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCTAACTT
TCATCAACTTCAATGGGTGGGTTTTTTATCTAATTTGATTTTTGTACCGTACTATTCGATTATACTGTTTCCTCTATCAA
TTTTATTCTTTATTACAAGCCATTTTATTGTGGGCTTAACGCCGCTAAATTACTTTGTTGACCTAAGTTTCAATTTTCAT
GATTGGTTACTAGACCTATTCACTCGAATCAAGCAATCACATTTTTCTATTCCTAAGTTTAATGATTGGATATTTATAAT
GTTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATAGATTGGTTACGTTTTGGACTATAATTA
TTATGACATTATTAATAACATATCCAACAAATTCACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGATAGTATT
TTATATGAAGGCGGGAAGAACCAAAATGTCTTGATTGATACAGGTGGAAAAGTGATTAATGATACTAAACAACCTAGTTT
TTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGAATTAGAGTATTTAATTTTAACACATC
CACACAATGACCATATTGGTGAAGTTGAATATATTATTAGTCATATTAAAATTAAGCATATAGTGATATACAATAAAGGA
TATAGTAGTAAAACATTGTTGTTATTATCAAAATTAAGCCATAAGTATAACATTAAACTTATGGATGTAAGACAAATTAG
TAGTTTTAAACTTGGGGATAGTAGTTTTCAATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAATATTCGA
TTATTACTATGATTACATATCAAAATAAAAAAGCTTTATTAATGGGAGATGCTAGTAAAAATAATGAATCTTTACTATTA
AAGAAATATAATTTGCCAGAGATTGATATTTTAAAAGTAGGACATCATGGAAGTAAGACAAGTAGTTCTAAAGAATTTAT
AGAGGTGATTAGGCCTAAAATAAGTTTGATTTCCTCTGGGAAGAACAATATGTATCATCTTCCTAACATAGAAGTTGTTA
AACGATTGCAAGGTATTCGCAGTCGCATTTACAATAGTCAACAAAACGGTGAAGTTACAATAGACTTAGATGAAAATTTA
AAAGTTGATTCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(474-679)

Competence protein (Competence)

(183-441)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Staphylococcus aureus N315

95.771

100

0.958
  comEC Staphylococcus aureus MW2

95.362

100

0.954

Multiple sequence alignment