Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   FPL13_RS07180 Genome accession   NZ_CP041968
Coordinates   1482327..1484285 (-) Length   652 a.a.
NCBI ID   WP_049514306.1    Uniprot ID   -
Organism   Streptococcus sp. KS 6     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1477327..1489285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL13_RS07145 (FPL13_07235) - 1478093..1478554 (-) 462 Protein_1421 GNAT family N-acetyltransferase -
  FPL13_RS07150 (FPL13_07240) - 1478659..1479540 (-) 882 WP_003025917.1 class II fructose-bisphosphate aldolase -
  FPL13_RS07155 (FPL13_07245) - 1479720..1480654 (-) 935 Protein_1423 IS30 family transposase -
  FPL13_RS07165 (FPL13_07255) - 1481012..1481422 (-) 411 WP_003073787.1 GyrI-like domain-containing protein -
  FPL13_RS07170 (FPL13_07260) - 1481473..1482039 (-) 567 Protein_1425 glutamine amidotransferase-related protein -
  FPL13_RS07180 (FPL13_07270) amiA3 1482327..1484285 (-) 1959 WP_049514306.1 peptide ABC transporter substrate-binding protein Regulator
  FPL13_RS07185 (FPL13_07275) mraY 1484810..1485793 (-) 984 WP_049514309.1 phospho-N-acetylmuramoyl-pentapeptide- transferase -
  FPL13_RS07190 (FPL13_07280) pbp2X 1485795..1488050 (-) 2256 WP_049514310.1 penicillin-binding protein PBP2X -
  FPL13_RS07195 (FPL13_07285) ftsL 1488054..1488374 (-) 321 WP_003031041.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72426.57 Da        Isoelectric Point: 7.8586

>NTDB_id=375023 FPL13_RS07180 WP_049514306.1 1482327..1484285(-) (amiA3) [Streptococcus sp. KS 6]
MKSSKWIIATGVVLSAGILLSGCGKSASSTSTYSYVYTQDPDTLNYLMANRATTSDVVTNLVDGLLENDQYGNLVPSLAK
SWTVSKDGLTYTYKLRKDAKWYTSEGEEYANVKAQDFVTGLKYAADNKSEALYLVQDSVKGLDAYIKGETKDFSTVGVKA
LDDYTVQYTLSRAETYWNSKTTNNILFPVNADFLKSQGKNFGSVKPTSILYNGPYLLKSLTAKSSMEFAKNPHYYDKKNV
HLDNIKLTYYDGSDQEALIRNFTDGAYSAARLYPNSSSFASVKKQYANNIIYSLQDATSYYYNFNLNRQSYNHTSKKTDA
QKAATQEAVLNKAFRQAINFAYNRTSYGAQSNGKDGATKVLRNTLVPPTFVSIGDKTFGDVVSSKLVNYGSEWSNMNLAD
AQDAYYNPEKAKAKFAQAKAELQAKGVQFPIHLDVPADQTSKTGVQWESSMKQSVESVLGTENVVIDIQQMSSDELNNIS
YFANTAAQKDYDLYNGGWSGDYQDPSTYLDTLNTKNGGSLQNFGLEPGQENDKIKAVGLDTYTEMLAEANAETNEATRYE
KYAEAQAWLIDSGLTMPNLSLGGTPSVTKTVPFSRSYSLVGIKGGSSNYFKYVKLQDKIVTTKEYESAKKKWLKEKEISN
KKAQDNYENHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=375023 FPL13_RS07180 WP_049514306.1 1482327..1484285(-) (amiA3) [Streptococcus sp. KS 6]
ATGAAATCATCAAAATGGATTATTGCAACAGGAGTTGTGCTAAGTGCTGGAATCCTATTATCAGGCTGTGGCAAGTCAGC
TTCTAGCACATCAACTTATTCATACGTGTATACACAAGATCCAGATACGCTAAATTATCTGATGGCGAACCGTGCGACAA
CATCAGATGTTGTGACTAACTTAGTTGATGGATTATTGGAAAATGACCAATACGGAAATTTAGTTCCGTCGCTGGCTAAG
TCATGGACAGTCTCCAAAGATGGCTTGACGTACACGTATAAATTACGTAAAGATGCTAAATGGTACACATCAGAAGGTGA
AGAGTACGCAAATGTAAAAGCGCAAGACTTTGTAACTGGTTTGAAATACGCCGCAGATAATAAATCAGAAGCCCTTTACC
TCGTTCAAGATTCTGTCAAAGGTTTGGATGCTTACATCAAGGGGGAAACGAAAGATTTTTCAACAGTTGGAGTAAAAGCT
CTAGATGACTATACAGTACAGTATACACTCAGCCGTGCAGAGACTTATTGGAATTCAAAAACGACCAATAATATCCTCTT
CCCAGTCAATGCAGATTTCTTGAAATCACAAGGAAAGAATTTTGGTTCTGTAAAACCAACCAGCATTCTATACAATGGTC
CTTATCTATTGAAGTCTCTGACAGCCAAGTCTTCTATGGAATTTGCTAAAAATCCTCATTACTATGATAAAAAGAATGTT
CATTTGGATAACATTAAATTGACATATTATGACGGATCTGACCAAGAAGCCCTTATCCGTAACTTCACAGATGGTGCCTA
TAGTGCAGCTCGTCTATATCCAAATAGCTCTAGTTTTGCTTCTGTTAAAAAACAATATGCTAACAATATCATCTATAGTT
TGCAAGATGCGACCAGCTACTATTATAACTTTAACTTAAATCGTCAGTCTTACAACCATACATCTAAGAAAACAGATGCT
CAAAAGGCTGCGACACAAGAAGCGGTGCTAAATAAAGCTTTCCGCCAAGCTATCAACTTTGCCTATAATCGTACTTCTTA
TGGTGCACAAAGTAATGGGAAAGACGGAGCGACAAAGGTATTGCGGAACACACTCGTGCCACCAACATTTGTTTCTATCG
GTGATAAAACGTTTGGTGATGTTGTGTCTTCTAAATTGGTAAACTATGGCTCAGAATGGTCAAATATGAATTTGGCCGAT
GCACAAGATGCTTATTACAATCCAGAAAAAGCCAAGGCGAAGTTTGCTCAAGCTAAAGCAGAATTGCAAGCAAAGGGTGT
TCAGTTCCCTATACACTTAGATGTACCGGCTGATCAGACAAGTAAAACTGGTGTTCAATGGGAAAGTTCCATGAAGCAAT
CTGTTGAGTCTGTCTTGGGCACAGAAAATGTTGTCATTGATATTCAACAAATGAGTTCAGATGAATTAAATAATATCAGT
TATTTTGCTAATACAGCTGCTCAAAAGGACTATGATCTGTATAATGGTGGTTGGTCTGGTGACTATCAAGACCCATCTAC
TTATTTAGATACATTGAATACAAAAAATGGTGGTAGTTTACAAAACTTCGGTTTGGAACCAGGTCAAGAAAATGATAAGA
TTAAGGCAGTTGGACTGGACACATATACAGAGATGCTAGCAGAAGCAAATGCTGAAACCAATGAAGCTACACGCTATGAA
AAATATGCCGAAGCGCAAGCGTGGTTGATTGATAGCGGTTTAACAATGCCCAATCTTTCTCTTGGAGGAACGCCGTCTGT
GACGAAAACAGTTCCATTTAGCCGTTCTTATTCATTAGTTGGAATCAAAGGAGGCTCAAGCAATTACTTTAAATATGTCA
AATTGCAAGACAAAATTGTAACAACAAAAGAATACGAAAGTGCTAAAAAGAAATGGCTAAAAGAAAAAGAAATCTCTAAT
AAAAAAGCACAAGATAACTATGAAAATCATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

57.686

100

0.581
  amiA3 Streptococcus thermophilus LMG 18311

57.534

100

0.58
  amiA Streptococcus salivarius strain HSISS4

57.23

100

0.577

Multiple sequence alignment