Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | FFE90_RS13490 | Genome accession | NZ_CP041757 |
| Coordinates | 2557262..2557558 (-) | Length | 98 a.a. |
| NCBI ID | WP_003230162.1 | Uniprot ID | A0A809FGR8 |
| Organism | Bacillus sp. KBS0812 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2552262..2562558
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFE90_RS13445 (FFE90_013445) | tasA | 2552670..2553455 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| FFE90_RS13450 (FFE90_013450) | sipW | 2553519..2554091 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| FFE90_RS13455 (FFE90_013455) | tapA | 2554075..2554836 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| FFE90_RS13460 (FFE90_013460) | - | 2555108..2555434 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| FFE90_RS13465 (FFE90_013465) | - | 2555476..2555655 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| FFE90_RS13470 (FFE90_013470) | comGG | 2555726..2556100 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| FFE90_RS13475 (FFE90_013475) | comGF | 2556101..2556484 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| FFE90_RS13480 (FFE90_013480) | comGE | 2556510..2556857 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| FFE90_RS13485 (FFE90_013485) | comGD | 2556841..2557272 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| FFE90_RS13490 (FFE90_013490) | comGC | 2557262..2557558 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| FFE90_RS13495 (FFE90_013495) | comGB | 2557572..2558609 (-) | 1038 | WP_009967727.1 | comG operon protein ComGB | Machinery gene |
| FFE90_RS13500 (FFE90_013500) | comGA | 2558596..2559666 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| FFE90_RS13510 (FFE90_013510) | corA | 2560078..2561031 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| FFE90_RS13515 (FFE90_013515) | - | 2561174..2562502 (+) | 1329 | WP_009967730.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10849.74 Da Isoelectric Point: 6.7083
>NTDB_id=373823 FFE90_RS13490 WP_003230162.1 2557262..2557558(-) (comGC) [Bacillus sp. KBS0812]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=373823 FFE90_RS13490 WP_003230162.1 2557262..2557558(-) (comGC) [Bacillus sp. KBS0812]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |