Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FNZ07_RS15435 | Genome accession | NZ_CP041745 |
| Coordinates | 457678..458877 (-) | Length | 399 a.a. |
| NCBI ID | WP_091009605.1 | Uniprot ID | - |
| Organism | Paraburkholderia megapolitana strain LMG 23650 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 452678..463877
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNZ07_RS15410 (FNZ07_15410) | - | 453959..454534 (+) | 576 | WP_091009589.1 | acyloxyacyl hydrolase | - |
| FNZ07_RS15415 (FNZ07_15415) | - | 454582..454962 (+) | 381 | WP_091009592.1 | nuclear transport factor 2 family protein | - |
| FNZ07_RS15420 (FNZ07_15420) | ybiB | 455001..455990 (-) | 990 | WP_091009595.1 | DNA-binding protein YbiB | - |
| FNZ07_RS15425 (FNZ07_15425) | - | 456185..456883 (+) | 699 | WP_091009598.1 | fumarylacetoacetate hydrolase family protein | - |
| FNZ07_RS15430 (FNZ07_15430) | maiA | 456909..457553 (+) | 645 | WP_091009601.1 | maleylacetoacetate isomerase | - |
| FNZ07_RS15435 (FNZ07_15435) | pilA | 457678..458877 (-) | 1200 | WP_091009605.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| FNZ07_RS15440 (FNZ07_15440) | rsmD | 459151..459768 (+) | 618 | WP_091009608.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FNZ07_RS15445 (FNZ07_15445) | - | 459735..459989 (-) | 255 | WP_091009610.1 | helix-turn-helix transcriptional regulator | - |
| FNZ07_RS15450 (FNZ07_15450) | - | 460647..460955 (+) | 309 | WP_091009613.1 | cellulose synthase | - |
| FNZ07_RS15455 (FNZ07_15455) | - | 460979..461158 (+) | 180 | WP_091009617.1 | hypothetical protein | - |
| FNZ07_RS15460 (FNZ07_15460) | - | 461189..461446 (+) | 258 | WP_245811404.1 | major capsid protein | - |
| FNZ07_RS15465 (FNZ07_15465) | - | 461689..461934 (+) | 246 | WP_143098031.1 | hypothetical protein | - |
| FNZ07_RS15470 (FNZ07_15470) | - | 462028..463458 (+) | 1431 | WP_091009622.1 | virulence factor TspB C-terminal domain-related protein | - |
| FNZ07_RS15475 (FNZ07_15475) | - | 463455..463736 (+) | 282 | WP_091009625.1 | DUF2523 family protein | - |
Sequence
Protein
Download Length: 399 a.a. Molecular weight: 42502.64 Da Isoelectric Point: 4.7236
>NTDB_id=373703 FNZ07_RS15435 WP_091009605.1 457678..458877(-) (pilA) [Paraburkholderia megapolitana strain LMG 23650]
MFSFFKRFKGSKAPDAAVEESAEARESAVPEAPAAARPSDPAPRPAAAPAQPAASAPVAAAEARKPEPEFESEPEFEPEP
DETALEAVEIVPPPVPEPAAKKSWLTRLKTGLSKTSSSLTGIFVGARIDEDLYEELEAALLMSDAGVEATEFLLESLREK
VRAERLTDPQQVKSALRTLLVDLLKPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAA
AREQLAIWGERNNVTVVSQESGDPAAVIFDAVGAARARKIDVLMADTAGRLPTQLHLMEELRKVKRVIGKALDGAPHEVL
LVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLDN
MFSFFKRFKGSKAPDAAVEESAEARESAVPEAPAAARPSDPAPRPAAAPAQPAASAPVAAAEARKPEPEFESEPEFEPEP
DETALEAVEIVPPPVPEPAAKKSWLTRLKTGLSKTSSSLTGIFVGARIDEDLYEELEAALLMSDAGVEATEFLLESLREK
VRAERLTDPQQVKSALRTLLVDLLKPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAA
AREQLAIWGERNNVTVVSQESGDPAAVIFDAVGAARARKIDVLMADTAGRLPTQLHLMEELRKVKRVIGKALDGAPHEVL
LVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLDN
Nucleotide
Download Length: 1200 bp
>NTDB_id=373703 FNZ07_RS15435 WP_091009605.1 457678..458877(-) (pilA) [Paraburkholderia megapolitana strain LMG 23650]
ATGTTCAGCTTTTTCAAACGATTCAAGGGCTCGAAAGCGCCTGATGCCGCGGTAGAAGAATCAGCGGAGGCGCGGGAGTC
TGCGGTGCCCGAGGCGCCTGCAGCCGCACGGCCGTCGGACCCGGCGCCACGGCCGGCCGCCGCACCTGCACAGCCCGCGG
CTTCCGCACCAGTCGCCGCCGCCGAAGCTCGCAAACCCGAACCCGAGTTCGAATCCGAACCTGAGTTCGAGCCAGAACCC
GACGAGACCGCCCTCGAAGCCGTCGAAATCGTTCCGCCGCCCGTACCCGAGCCCGCCGCAAAGAAATCGTGGCTCACGCG
CCTGAAAACCGGTCTGTCGAAAACGAGTTCGAGCCTGACCGGCATTTTCGTCGGCGCGCGCATCGACGAGGACCTGTACG
AGGAACTCGAAGCCGCGCTGCTGATGTCGGACGCGGGGGTCGAAGCCACCGAATTCCTGCTTGAATCGCTGCGCGAAAAA
GTACGCGCGGAAAGGCTCACGGATCCACAGCAAGTCAAAAGCGCGCTGCGCACGCTGCTCGTCGATCTGTTGAAGCCACT
CGAAAAATCACTGATGCTCGGCCGCGCACAGCCGCTCGTGATGATGATCGCGGGCGTGAACGGTGCCGGCAAGACGACCA
GCATCGGCAAGCTCGCCAAGCACCTGCAGCGCTTCGATCAATCGGTGCTGCTCGCCGCCGGCGACACCTTCCGCGCCGCC
GCGCGCGAACAGCTCGCGATCTGGGGCGAGCGCAACAACGTGACGGTCGTCTCGCAGGAAAGCGGCGATCCGGCGGCGGT
GATTTTCGATGCGGTCGGCGCGGCACGCGCGCGCAAGATCGATGTGCTGATGGCCGACACTGCGGGCCGCCTGCCGACGC
AGCTCCACCTGATGGAAGAACTGCGCAAGGTGAAGCGCGTGATCGGTAAGGCACTCGACGGCGCGCCGCACGAAGTGCTG
CTCGTCATCGATGCGAATACCGGGCAGAACGCACTCGCCCAGGTGAAAGCCTTCGACGACGCGCTCGGCCTCACGGGTCT
GATCGTCACGAAGCTGGACGGCACGGCGAAGGGCGGCATCCTCGCGGCGATCGCGCGGCAACGCCCGGTGCCGGTTTATT
TCATCGGCGTCGGTGAGAAGGTTGAAGATCTGCAACCGTTCAGCGCGGAAGAGTTCGCGGACGCGTTGCTCGACAACTGA
ATGTTCAGCTTTTTCAAACGATTCAAGGGCTCGAAAGCGCCTGATGCCGCGGTAGAAGAATCAGCGGAGGCGCGGGAGTC
TGCGGTGCCCGAGGCGCCTGCAGCCGCACGGCCGTCGGACCCGGCGCCACGGCCGGCCGCCGCACCTGCACAGCCCGCGG
CTTCCGCACCAGTCGCCGCCGCCGAAGCTCGCAAACCCGAACCCGAGTTCGAATCCGAACCTGAGTTCGAGCCAGAACCC
GACGAGACCGCCCTCGAAGCCGTCGAAATCGTTCCGCCGCCCGTACCCGAGCCCGCCGCAAAGAAATCGTGGCTCACGCG
CCTGAAAACCGGTCTGTCGAAAACGAGTTCGAGCCTGACCGGCATTTTCGTCGGCGCGCGCATCGACGAGGACCTGTACG
AGGAACTCGAAGCCGCGCTGCTGATGTCGGACGCGGGGGTCGAAGCCACCGAATTCCTGCTTGAATCGCTGCGCGAAAAA
GTACGCGCGGAAAGGCTCACGGATCCACAGCAAGTCAAAAGCGCGCTGCGCACGCTGCTCGTCGATCTGTTGAAGCCACT
CGAAAAATCACTGATGCTCGGCCGCGCACAGCCGCTCGTGATGATGATCGCGGGCGTGAACGGTGCCGGCAAGACGACCA
GCATCGGCAAGCTCGCCAAGCACCTGCAGCGCTTCGATCAATCGGTGCTGCTCGCCGCCGGCGACACCTTCCGCGCCGCC
GCGCGCGAACAGCTCGCGATCTGGGGCGAGCGCAACAACGTGACGGTCGTCTCGCAGGAAAGCGGCGATCCGGCGGCGGT
GATTTTCGATGCGGTCGGCGCGGCACGCGCGCGCAAGATCGATGTGCTGATGGCCGACACTGCGGGCCGCCTGCCGACGC
AGCTCCACCTGATGGAAGAACTGCGCAAGGTGAAGCGCGTGATCGGTAAGGCACTCGACGGCGCGCCGCACGAAGTGCTG
CTCGTCATCGATGCGAATACCGGGCAGAACGCACTCGCCCAGGTGAAAGCCTTCGACGACGCGCTCGGCCTCACGGGTCT
GATCGTCACGAAGCTGGACGGCACGGCGAAGGGCGGCATCCTCGCGGCGATCGCGCGGCAACGCCCGGTGCCGGTTTATT
TCATCGGCGTCGGTGAGAAGGTTGAAGATCTGCAACCGTTCAGCGCGGAAGAGTTCGCGGACGCGTTGCTCGACAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
54.436 |
100 |
0.569 |