Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   G6536_RS09095 Genome accession   NZ_CP049330
Coordinates   1776957..1779005 (+) Length   682 a.a.
NCBI ID   WP_009328528.1    Uniprot ID   Q65JR1
Organism   Bacillus licheniformis strain CP6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1771957..1784005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6536_RS09065 (G6536_09180) spoVM 1772503..1772583 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  G6536_RS09070 (G6536_09185) rpmB 1772688..1772876 (-) 189 WP_003181685.1 50S ribosomal protein L28 -
  G6536_RS09075 (G6536_09190) - 1773164..1773526 (+) 363 WP_003181687.1 Asp23/Gls24 family envelope stress response protein -
  G6536_RS09080 (G6536_09195) - 1773544..1775214 (+) 1671 WP_003181689.1 DAK2 domain-containing protein -
  G6536_RS09085 (G6536_09200) sdaAB 1775396..1776058 (+) 663 WP_003181691.1 L-serine ammonia-lyase, iron-sulfur-dependent subunit beta -
  G6536_RS09090 (G6536_09205) sdaAA 1776077..1776979 (+) 903 WP_003181693.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha -
  G6536_RS09095 (G6536_09210) recG 1776957..1779005 (+) 2049 WP_009328528.1 ATP-dependent DNA helicase RecG Machinery gene
  G6536_RS09100 (G6536_09215) fapR 1779122..1779688 (+) 567 WP_003181698.1 transcription factor FapR -
  G6536_RS09105 (G6536_09220) plsX 1779706..1780698 (+) 993 WP_003181700.1 phosphate acyltransferase PlsX -
  G6536_RS09110 (G6536_09225) fabD 1780716..1781675 (+) 960 WP_003181702.1 ACP S-malonyltransferase -
  G6536_RS09115 (G6536_09230) fabG 1781662..1782405 (+) 744 WP_003181704.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  G6536_RS09120 (G6536_09235) acpP 1782482..1782715 (+) 234 WP_003181706.1 acyl carrier protein -
  G6536_RS09125 (G6536_09240) rnc 1782857..1783606 (+) 750 WP_009328527.1 ribonuclease III -

Sequence

Protein


Download         Length: 682 a.a.        Molecular weight: 77627.13 Da        Isoelectric Point: 7.3550

>NTDB_id=373556 G6536_RS09095 WP_009328528.1 1776957..1779005(+) (recG) [Bacillus licheniformis strain CP6]
MEHNLQLSISVIKGVGTETEKTLNELGIYTVLDLLNYFPYRYDDYELRDLEDVAHDERVTVEGKVHSEPSLAYYGKKRSR
LTFRLLVGNYLITAVCFNRPYLKKKLAIGSIVTVTGKWDKHRQSVMVQELKNGPHQGDQSIEPVYSVKENITVKTMRKLI
QEAVRSHLPFAEDPLPEKLRTAYKLLSYQEAVKAMHKPESREALKHARRRFVYEEFLLFQLKMQALRKFEREASDGISHT
FRLEDVNSFVKSLPFPLTNAQAKALDDILRDMASGYKMNRLLQGDVGSGKTAVAAIALYASLLSGFQGAMMVPTEILAEQ
HADSLVSLFEQHDVNVALLTSSVKGKRRRELLERLKEGEIDILVGTHALIQDDVHFKQLGLVITDEQHRFGVEQRKKLRS
KGKDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLERILAFIDKELKKGRQAYVICPLIEESD
KLDVQNAIDVHSMLTHAFRGRWQIGLMHGKLSNDEKEQVMRQFSKNECQILVSTTVVEVGVNVPNATVMLIYDADRFGLS
QLHQLRGRVGRGDHQSYCILMADPKSETGKERMSIMSETTDGFELSEKDLELRGPGDFFGKKQSGMPEFKVADMVHDYRA
LETARRDAAELVSSKAFWTDAEYKSLREHLQNSGVMDGEKLS

Nucleotide


Download         Length: 2049 bp        

>NTDB_id=373556 G6536_RS09095 WP_009328528.1 1776957..1779005(+) (recG) [Bacillus licheniformis strain CP6]
GTGGAACACAATCTGCAACTTAGTATATCTGTTATAAAAGGCGTCGGGACGGAAACGGAAAAAACGTTGAACGAGCTCGG
AATCTATACGGTTCTCGATCTTTTAAACTACTTCCCGTACCGATATGACGATTATGAATTGCGCGATTTGGAAGATGTGG
CACACGATGAACGAGTGACGGTGGAAGGGAAGGTTCACAGCGAGCCTTCTCTTGCCTATTACGGGAAAAAGCGGAGCCGT
CTCACGTTCCGGCTTTTGGTCGGGAACTATTTGATCACAGCGGTTTGCTTTAACAGGCCTTATTTGAAAAAAAAGCTTGC
GATCGGCTCGATTGTTACCGTAACCGGAAAATGGGACAAGCACAGACAATCCGTGATGGTGCAAGAGCTGAAAAACGGGC
CGCACCAGGGTGATCAGTCGATTGAACCCGTATACTCCGTCAAAGAAAACATCACCGTAAAGACGATGAGGAAATTGATT
CAGGAAGCTGTCCGCAGCCATTTGCCGTTTGCCGAAGATCCTCTTCCGGAAAAGCTTCGGACCGCCTACAAACTTCTGTC
TTACCAGGAGGCGGTAAAGGCGATGCACAAGCCCGAGTCGAGGGAAGCTTTAAAGCATGCGCGGCGCCGTTTTGTATATG
AGGAATTTTTGCTGTTTCAGCTGAAAATGCAGGCTTTGCGAAAGTTCGAGCGGGAAGCGTCCGACGGAATCAGCCACACC
TTTCGGCTCGAAGACGTCAATTCGTTTGTCAAAAGCCTTCCGTTTCCTTTGACAAACGCGCAGGCGAAAGCGCTCGACGA
CATATTAAGGGACATGGCTTCAGGGTATAAAATGAATCGGCTTTTGCAAGGAGACGTCGGTTCAGGCAAAACAGCCGTCG
CCGCGATTGCACTATACGCCTCGCTGCTTTCCGGATTCCAGGGGGCGATGATGGTTCCGACCGAAATACTGGCGGAACAG
CACGCCGATTCGCTTGTATCCCTCTTTGAGCAGCACGACGTCAATGTGGCGCTTTTAACAAGCTCTGTGAAAGGGAAAAG
GAGAAGAGAGCTTTTAGAAAGATTAAAAGAAGGAGAAATTGATATTTTGGTGGGGACGCACGCCCTTATTCAGGACGATG
TCCACTTTAAACAGCTCGGGCTCGTGATCACCGATGAACAGCACCGCTTCGGCGTCGAGCAAAGAAAAAAACTGAGAAGC
AAAGGGAAAGATCCCGATGTCTTGTTTATGACGGCGACGCCGATTCCGAGAACACTGGCGATCACGGTTTTCGGGGAAAT
GGATGTGTCCGTCATCGATGAAATGCCGGCTGGGCGAAAGCGGATCGAGACGTATTGGGTAAAGCACGACATGCTCGAAC
GGATTCTCGCGTTTATCGATAAAGAACTGAAAAAAGGCAGACAGGCGTATGTGATCTGTCCCTTGATTGAAGAGTCGGAC
AAGCTCGACGTTCAAAATGCAATTGATGTGCACAGCATGCTGACTCATGCCTTCAGGGGAAGATGGCAGATCGGTCTCAT
GCACGGAAAGCTGTCAAATGACGAGAAAGAACAGGTAATGAGGCAGTTCAGCAAAAACGAATGCCAGATTCTCGTTTCCA
CAACCGTCGTTGAAGTCGGGGTAAACGTTCCGAATGCGACGGTCATGCTGATCTATGATGCCGACCGGTTCGGTCTTTCC
CAGCTGCATCAGCTTCGCGGCCGGGTCGGACGGGGCGATCACCAGTCGTATTGCATCCTGATGGCAGACCCGAAATCTGA
GACGGGAAAAGAGCGCATGAGCATCATGTCTGAGACGACGGACGGCTTTGAGCTTTCTGAAAAAGATCTTGAACTCAGAG
GGCCCGGGGACTTTTTCGGCAAGAAACAGAGCGGGATGCCGGAGTTTAAAGTCGCCGACATGGTTCACGACTACCGCGCG
CTGGAAACGGCAAGAAGAGACGCTGCAGAACTTGTCTCTTCAAAAGCGTTCTGGACGGATGCCGAATATAAAAGCCTGCG
GGAACACTTGCAAAACAGCGGGGTTATGGACGGAGAAAAGCTGAGCTGA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(452-572)

RecG wedge domain (RecG_wedge)

(9-164)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(599-672)

DEAD/DEAH box helicase (DEAD)

(258-415)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65JR1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

81.085

100

0.811
  recG/mmsA Streptococcus pneumoniae R6

49.185

98.974

0.487
  recG/mmsA Streptococcus pneumoniae R36A

49.185

98.974

0.487
  recG Neisseria meningitidis strain C311

39.445

95.161

0.375