Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   FOG18_RS05505 Genome accession   NZ_CP041668
Coordinates   1213789..1216524 (-) Length   911 a.a.
NCBI ID   WP_143866826.1    Uniprot ID   -
Organism   Legionella israelensis strain L18-01051     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1208789..1221524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOG18_RS05480 (FOG18_05480) - 1209768..1210199 (-) 432 WP_143866818.1 secondary thiamine-phosphate synthase enzyme YjbQ -
  FOG18_RS05485 (FOG18_05485) - 1210192..1210512 (-) 321 WP_342353809.1 BolA family protein -
  FOG18_RS05490 (FOG18_05490) - 1210700..1211152 (+) 453 WP_143866820.1 hypothetical protein -
  FOG18_RS05495 (FOG18_05495) pilA2 1211393..1211812 (+) 420 WP_185967349.1 pilin Machinery gene
  FOG18_RS05500 (FOG18_05500) - 1212508..1213758 (-) 1251 WP_143866824.1 6-phosphofructokinase -
  FOG18_RS05505 (FOG18_05505) letS 1213789..1216524 (-) 2736 WP_143866826.1 two-component system sensor histidine kinase LetS Regulator
  FOG18_RS13990 - 1216599..1216829 (+) 231 WP_058502248.1 hypothetical protein -
  FOG18_RS05510 (FOG18_05510) gltX 1216801..1218213 (+) 1413 WP_143866828.1 glutamate--tRNA ligase -
  FOG18_RS05515 (FOG18_05515) - 1218274..1218762 (-) 489 WP_143866830.1 YchJ family metal-binding protein -
  FOG18_RS05520 (FOG18_05520) - 1218886..1219596 (+) 711 WP_143866832.1 glutathione S-transferase C-terminal domain-containing protein -

Sequence


Protein


Download         Length: 911 a.a.        Molecular weight: 103467.73 Da        Isoelectric Point: 7.7284

>NTDB_id=372933 FOG18_RS05505 WP_143866826.1 1213789..1216524(-) (letS) [Legionella israelensis strain L18-01051]
MKSLGIKYQLRITTLIPVLLVALLFALFYNGQFSKDLKQHMSRLGEAYIRQLMPAAQYALQQDNHRTLQGLINASTINQE
VKAVAFYDANGRLLAYRGGKHSLKKPFTPPAFTGDFIESKQLNSTTINFFAPITIPKYNLYSTDILRPSTQNFILQPDDI
LGWLSINIDTQSMLIKRYQMLIVTIFITLFGLLIGLATHYFLSKRIYMPISRLRRSMKQILRNEFETEIRVSSAGELGVI
EEGCAHLQKQYLDTIRDLNHHIEVATADLQQSLELLEEKNIELSMEKKKSEEKNRQKSEFIANMSHEIRTPMNGVIGFTN
VLLESKLDPLQLDYVKTIKTSAQDLLQIINDILDYSKMDAGKLHLDCIPLDIRACIDEVLVLSAPNAHKKGIDLIPITSL
EVPRTVLGDPLRIKQIISNLVNNAIKFTDKGYVLIRTEVEQEMANDYLLRISVSDTGIGISKEDQSKLFTAFNQADTSIT
RRYGGSGLGLVICKKLAEEMKGRISLSSELHKGSTFSVHIRVEKLSSYEVEKNQNYRFAHLKVLCFDENRLQLESITNGL
GHWGIQCTTVNAFDKLAKALEHNKNCDFAFINVKQGYEAQIADLLKAHPNKTYILVSKWPIADVKSFGAQVFLYQPISIQ
KLHDIIESLMHQPSVPPSLVPQEVENLREQLRFSHPDILIAEDNPVNRMLLNSLLGENANMESVSDGEQAVVICNEKRFQ
VILLDLQMPKLNGLEAAKKIRHESLLNRHTPILLLSASSTDINRDKLKNAGIDHCLHKPVEEKQLISHLLRLMDKAQHAA
IDWSLCVQKLSGNQKLAEDFLARFVEELKKDRLELIQLMRDKNIRGLASAAHKLHGACSFCGVPMLQKKVREFEIMTQQV
KNSEDLRSLFAELVQRIDAVIDEYENYYSEP

Nucleotide


Download         Length: 2736 bp        

>NTDB_id=372933 FOG18_RS05505 WP_143866826.1 1213789..1216524(-) (letS) [Legionella israelensis strain L18-01051]
TTGAAAAGCCTTGGTATTAAATACCAGCTCAGGATTACAACACTTATTCCTGTGCTTCTCGTCGCTTTATTGTTTGCCTT
ATTTTATAACGGTCAATTCAGCAAAGATTTAAAACAACACATGTCGCGTCTCGGCGAAGCTTACATTCGCCAATTAATGC
CAGCTGCTCAGTATGCCTTACAGCAGGATAACCATCGGACTCTGCAAGGGCTCATTAACGCTTCTACCATCAATCAGGAA
GTGAAAGCCGTTGCTTTCTACGATGCCAATGGACGGCTGCTCGCTTATCGCGGAGGAAAACATTCTCTGAAAAAACCCTT
TACTCCTCCAGCCTTTACCGGTGATTTTATAGAAAGCAAGCAACTGAATTCTACCACCATTAATTTTTTCGCCCCCATCA
CTATCCCAAAATATAACTTATATTCCACGGATATACTGAGACCTTCAACCCAGAATTTTATTTTACAGCCAGATGATATT
TTGGGATGGCTGTCTATCAATATTGATACCCAATCCATGTTGATCAAGCGCTATCAAATGTTGATTGTTACGATTTTTAT
TACGCTGTTTGGATTACTGATTGGCTTGGCCACGCATTATTTTTTGTCAAAACGCATTTATATGCCTATCAGCCGATTAC
GCAGGAGCATGAAACAGATTTTAAGGAATGAATTTGAGACAGAAATTCGGGTTTCAAGCGCAGGGGAGCTGGGTGTTATT
GAGGAGGGCTGTGCCCATTTGCAGAAACAGTATCTCGACACCATACGTGATCTGAATCATCATATTGAAGTGGCCACGGC
TGACCTACAGCAAAGCCTTGAATTGCTGGAAGAAAAAAACATTGAATTATCGATGGAGAAGAAAAAATCAGAAGAAAAGA
ACCGGCAAAAATCAGAATTCATTGCCAACATGAGTCATGAAATCCGCACCCCTATGAATGGGGTGATTGGTTTTACTAAC
GTATTGCTGGAAAGTAAACTGGATCCCTTACAGCTCGATTATGTTAAAACGATCAAAACTTCTGCTCAGGATCTATTACA
AATCATCAACGACATTCTTGATTATTCAAAAATGGATGCCGGTAAACTCCATCTCGACTGTATACCTCTTGACATACGGG
CCTGCATTGATGAAGTTCTTGTTCTTTCTGCTCCCAATGCTCACAAAAAAGGCATTGACTTGATTCCAATTACCTCTCTC
GAGGTTCCAAGAACGGTTCTCGGTGATCCATTACGCATTAAACAAATCATATCCAATCTGGTGAACAATGCCATAAAATT
CACCGATAAAGGATACGTTCTTATCCGAACCGAGGTTGAGCAGGAGATGGCAAATGATTACCTGCTTCGCATCTCTGTAT
CCGATACCGGCATCGGGATTTCAAAAGAGGATCAGAGTAAATTATTTACAGCCTTCAATCAGGCCGATACCAGCATTACC
CGTCGCTACGGCGGCTCCGGCCTTGGCCTTGTCATTTGCAAGAAACTGGCTGAAGAAATGAAAGGACGCATCAGTCTGAG
TAGTGAATTACATAAAGGCTCAACCTTCTCCGTTCATATTCGTGTGGAGAAACTCTCATCCTATGAAGTTGAAAAAAATC
AGAATTATCGTTTTGCTCATCTTAAAGTGTTATGCTTTGACGAAAACAGACTGCAACTGGAATCCATTACCAATGGCTTA
GGTCATTGGGGCATACAGTGCACTACTGTCAATGCCTTTGACAAATTAGCCAAAGCCTTAGAGCATAATAAAAACTGCGA
TTTCGCCTTTATTAACGTCAAACAAGGATATGAAGCGCAGATTGCCGATCTTCTCAAAGCTCACCCGAATAAAACTTACA
TTCTTGTTTCAAAATGGCCAATTGCGGATGTCAAATCCTTCGGCGCACAAGTTTTTTTATACCAACCCATTAGCATTCAG
AAACTTCATGACATTATTGAATCCCTAATGCATCAACCATCAGTCCCCCCTTCGCTTGTGCCTCAGGAAGTTGAAAATTT
AAGAGAACAACTGAGATTTTCTCATCCTGATATCCTGATAGCGGAAGATAATCCGGTCAACCGTATGTTGTTAAACTCCT
TGCTCGGTGAAAATGCAAATATGGAATCAGTAAGTGATGGTGAGCAAGCAGTCGTAATCTGTAATGAAAAACGTTTCCAG
GTCATTCTCCTCGATCTGCAAATGCCAAAGCTCAACGGACTTGAAGCTGCCAAAAAAATTCGACATGAATCTTTACTCAA
TCGTCATACGCCTATTCTTTTATTAAGCGCCAGCAGTACCGATATTAACCGCGATAAATTAAAAAATGCCGGTATTGATC
ATTGCCTGCATAAGCCTGTTGAGGAAAAACAACTCATCAGTCATTTACTTCGTTTGATGGACAAGGCTCAACACGCAGCC
ATTGATTGGTCCTTATGCGTGCAGAAACTGTCCGGTAACCAGAAGCTCGCTGAAGATTTTCTCGCCCGTTTTGTAGAAGA
ATTAAAAAAAGACCGGCTTGAATTGATTCAGTTGATGCGCGACAAAAACATTCGTGGTCTTGCCAGTGCCGCACACAAAT
TACATGGGGCCTGCAGTTTCTGTGGCGTTCCTATGTTGCAGAAAAAAGTAAGGGAATTTGAAATCATGACCCAGCAGGTC
AAAAATTCAGAAGATTTACGCTCACTTTTCGCTGAATTAGTCCAGCGTATTGACGCCGTTATTGATGAATATGAAAATTA
TTACAGCGAACCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

71.209

99.89

0.711


Multiple sequence alignment