Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FNV33_RS00265 | Genome accession | NZ_CP041626 |
| Coordinates | 57531..58046 (+) | Length | 171 a.a. |
| NCBI ID | WP_077863029.1 | Uniprot ID | A0A1S8KPC8 |
| Organism | Dolosigranulum pigrum strain 83VPs-KB5 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 52531..63046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNV33_RS00245 (FNV33_00245) | - | 53131..53868 (+) | 738 | WP_004635367.1 | TraX family protein | - |
| FNV33_RS00250 (FNV33_00250) | purB | 53964..55259 (-) | 1296 | WP_143332966.1 | adenylosuccinate lyase | - |
| FNV33_RS00255 (FNV33_00255) | nox | 55521..56858 (-) | 1338 | WP_112788477.1 | H2O-forming NADH oxidase | - |
| FNV33_RS00260 (FNV33_00260) | rpsF | 57177..57476 (+) | 300 | WP_004635364.1 | 30S ribosomal protein S6 | - |
| FNV33_RS00265 (FNV33_00265) | ssb | 57531..58046 (+) | 516 | WP_077863029.1 | single-stranded DNA-binding protein | Machinery gene |
| FNV33_RS00270 (FNV33_00270) | rpsR | 58073..58312 (+) | 240 | WP_111949546.1 | 30S ribosomal protein S18 | - |
| FNV33_RS00275 (FNV33_00275) | - | 58462..60453 (+) | 1992 | WP_004635361.1 | DHH family phosphoesterase | - |
| FNV33_RS00280 (FNV33_00280) | rplI | 60469..60921 (+) | 453 | WP_077863030.1 | 50S ribosomal protein L9 | - |
| FNV33_RS00285 (FNV33_00285) | dnaB | 61081..62496 (+) | 1416 | WP_185963626.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19299.70 Da Isoelectric Point: 4.4764
>NTDB_id=372533 FNV33_RS00265 WP_077863029.1 57531..58046(+) (ssb) [Dolosigranulum pigrum strain 83VPs-KB5]
MINNVTLVGRLTRDPELRYTGNGTAVVSFTIAADRPFTNSQGEREADFINCVAWRRTAEVVSNYTHKGSLVGVTGRIQTR
SYENNEGRTVYVTEVVVENFRMLESKATAENRRSNDDYSNGGFNNNQSFNQSRNNQSQNQNSFSSNNKFDNDPFDTSNND
DIDISDDDLPF
MINNVTLVGRLTRDPELRYTGNGTAVVSFTIAADRPFTNSQGEREADFINCVAWRRTAEVVSNYTHKGSLVGVTGRIQTR
SYENNEGRTVYVTEVVVENFRMLESKATAENRRSNDDYSNGGFNNNQSFNQSRNNQSQNQNSFSSNNKFDNDPFDTSNND
DIDISDDDLPF
Nucleotide
Download Length: 516 bp
>NTDB_id=372533 FNV33_RS00265 WP_077863029.1 57531..58046(+) (ssb) [Dolosigranulum pigrum strain 83VPs-KB5]
TTGATTAATAATGTTACGCTAGTAGGTAGATTAACGCGAGATCCTGAGTTGAGATATACAGGGAACGGAACAGCCGTCGT
ATCTTTTACAATTGCAGCTGATCGTCCGTTTACGAATAGTCAAGGTGAACGCGAAGCTGATTTTATTAATTGTGTGGCGT
GGAGAAGAACAGCGGAAGTTGTTTCGAATTACACACACAAGGGATCATTAGTTGGAGTAACTGGTCGTATTCAAACACGC
AGTTATGAAAATAATGAAGGCCGAACGGTTTATGTGACAGAAGTTGTGGTTGAGAACTTCAGAATGTTAGAATCAAAAGC
AACTGCTGAAAACCGTCGATCAAATGATGATTACAGTAATGGCGGTTTTAATAACAATCAATCATTTAATCAGTCCCGAA
ATAATCAATCTCAGAATCAGAATAGTTTCAGTTCGAATAATAAGTTTGACAATGATCCATTCGATACAAGTAATAACGAT
GATATTGATATATCAGATGATGATTTACCATTTTGA
TTGATTAATAATGTTACGCTAGTAGGTAGATTAACGCGAGATCCTGAGTTGAGATATACAGGGAACGGAACAGCCGTCGT
ATCTTTTACAATTGCAGCTGATCGTCCGTTTACGAATAGTCAAGGTGAACGCGAAGCTGATTTTATTAATTGTGTGGCGT
GGAGAAGAACAGCGGAAGTTGTTTCGAATTACACACACAAGGGATCATTAGTTGGAGTAACTGGTCGTATTCAAACACGC
AGTTATGAAAATAATGAAGGCCGAACGGTTTATGTGACAGAAGTTGTGGTTGAGAACTTCAGAATGTTAGAATCAAAAGC
AACTGCTGAAAACCGTCGATCAAATGATGATTACAGTAATGGCGGTTTTAATAACAATCAATCATTTAATCAGTCCCGAA
ATAATCAATCTCAGAATCAGAATAGTTTCAGTTCGAATAATAAGTTTGACAATGATCCATTCGATACAAGTAATAACGAT
GATATTGATATATCAGATGATGATTTACCATTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.069 |
100 |
0.567 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.247 |
100 |
0.544 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
61.988 |
0.368 |