Detailed information NTG0372467

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: CVULP_RS00780
• Genome accession: NZ_CP041617
• Coordinates: 150146..151327 (+)
• Length: 393 a.a.
• NCBI ID: WP_099506885.1
• Uniprot ID: -
• Organism: Campylobacter vulpis strain 251/13
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 145146..156327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVULP_RS00755 (CVULP_0146)	-	145693..145992 (+)	300	WP_099462478.1	transformation system protein	-
CVULP_RS00760 (CVULP_0147)	ctsD	145970..147379 (+)	1410	WP_099462480.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
CVULP_RS00765 (CVULP_0148)	-	147372..147977 (+)	606	WP_099506887.1	ATP-binding protein	-
CVULP_RS00770 (CVULP_0149)	-	147979..148545 (+)	567	WP_099506923.1	transformation system protein	-
CVULP_RS00775 (CVULP_0150)	ctsE	148542..150149 (+)	1608	WP_099506886.1	GspE/PulE family protein	Machinery gene
CVULP_RS00780 (CVULP_0151)	ctsF	150146..151327 (+)	1182	WP_099506885.1	type II secretion system F family protein	Machinery gene
CVULP_RS00785 (CVULP_0152)	-	151354..153186 (-)	1833	WP_265415674.1	flagellin	-
CVULP_RS00790 (CVULP_0153)	-	153298..153906 (-)	609	WP_099507284.1	hypothetical protein	-
CVULP_RS00795 (CVULP_0154)	truD	153961..155082 (-)	1122	WP_099507285.1	tRNA pseudouridine(13) synthase TruD	-
CVULP_RS00800 (CVULP_0155)	-	155051..155866 (-)	816	WP_099507286.1	thiamine-phosphate kinase	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 44857.49 Da
• Isoelectric Point: 9.8467

>NTDB_id=372467 CVULP_RS00780 WP_099506885.1 150146..151327(+) (ctsF) [Campylobacter vulpis strain 251/13]
MKTYELYYLKNQQKLRKILKAKNLNTAQAMALRQNLQILSLKELKKQNKIKISDTLFCAFFKEFALLLNAGLSIKEALSL
MSESSSKGLKDVVKELNANLNLGQSLSVAFSSLALNLSLSELSLIKMSEKTGNLAHIFSQIAELRTRLILNKKRFKKAIH
YPCLVLLALFGAFLFLMFFVVPEFLDIFESLGANLPLITQILLSIYVFLSENYLLLICVFVGFCGAFVLSYKRSVKFAFW
VDFMLLKFPFFSRFILYHQNYYFFMIFSLLLQSGNALTHAFHLASSSVKNYYIKEKFKHINTSLEQGLELSLAFKKAGIF
DELVISLLHSAMKSGTLDTLSAKIAHFYEEKQEDFIEIFLKFLEPLMTLLVGILVLFLALGIFLPMWELSGGV

Nucleotide

• Length: 1182 bp

>NTDB_id=372467 CVULP_RS00780 WP_099506885.1 150146..151327(+) (ctsF) [Campylobacter vulpis strain 251/13]
GTGAAAACCTACGAGCTTTATTATCTTAAAAACCAGCAAAAATTAAGGAAAATTTTAAAAGCGAAAAATCTTAACACTGC
TCAAGCTATGGCTTTAAGGCAAAATTTACAAATCTTAAGCCTAAAAGAGCTCAAAAAGCAAAATAAGATTAAGATTAGTG
ATACGCTTTTTTGTGCTTTTTTTAAAGAATTTGCCCTTTTGCTTAATGCGGGATTAAGCATTAAGGAGGCTTTAAGCTTG
ATGAGTGAAAGTTCTAGTAAAGGTTTAAAAGATGTGGTTAAAGAATTAAATGCAAATTTAAATCTGGGACAGAGTTTAAG
TGTGGCATTTAGTAGCTTGGCTTTAAATTTAAGCTTGAGTGAATTAAGCCTTATTAAAATGAGTGAAAAGACAGGAAATT
TGGCACATATTTTTTCCCAAATTGCAGAATTAAGAACAAGATTGATTTTAAACAAAAAGCGTTTTAAAAAAGCGATTCAT
TATCCTTGCTTAGTTCTTTTGGCACTTTTTGGGGCATTTTTATTTTTAATGTTTTTTGTTGTGCCAGAATTTTTAGATAT
TTTTGAAAGTTTAGGAGCAAATTTACCCTTAATAACACAAATTTTACTTAGCATTTATGTATTTTTAAGTGAGAATTATC
TGCTTTTGATTTGCGTTTTTGTAGGTTTTTGTGGAGCATTTGTTTTAAGTTATAAAAGAAGTGTAAAATTTGCTTTTTGG
GTGGATTTTATGCTTTTAAAATTTCCTTTTTTCTCGCGTTTTATTCTTTATCATCAAAATTATTATTTTTTTATGATTTT
CTCTTTACTTTTGCAAAGTGGCAATGCTCTCACACACGCTTTTCATTTGGCAAGTTCTAGCGTAAAAAATTATTATATCA
AAGAGAAATTTAAGCACATTAATACTTCTTTAGAGCAGGGCTTGGAACTTTCTTTAGCCTTTAAAAAAGCGGGGATTTTT
GATGAGCTTGTTATTTCTTTGCTGCACAGCGCGATGAAAAGCGGAACTTTAGATACTTTAAGTGCTAAAATCGCCCACTT
TTATGAAGAAAAACAAGAAGATTTTATTGAGATATTTTTAAAATTCTTAGAACCTTTGATGACTTTACTTGTAGGAATTT
TGGTTTTATTTTTAGCTCTAGGGATTTTCTTGCCGATGTGGGAGCTAAGTGGTGGAGTATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (266-385)

• Type II secretion system (T2SS), protein F (T2SSF) (60-182)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	50.254	100	0.504