Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FMM01_RS05195 Genome accession   NZ_CP041364
Coordinates   1008536..1009813 (-) Length   425 a.a.
NCBI ID   WP_150391837.1    Uniprot ID   -
Organism   Schleiferilactobacillus harbinensis strain NSMJ42     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1003536..1014813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FMM01_RS05190 (FMM01_05190) - 1006774..1008498 (-) 1725 WP_027827710.1 proline--tRNA ligase -
  FMM01_RS05195 (FMM01_05195) eeP 1008536..1009813 (-) 1278 WP_150391837.1 RIP metalloprotease RseP Regulator
  FMM01_RS05200 (FMM01_05200) - 1009827..1010642 (-) 816 WP_150391838.1 phosphatidate cytidylyltransferase -
  FMM01_RS05205 (FMM01_05205) - 1010655..1011392 (-) 738 WP_150391839.1 isoprenyl transferase -
  FMM01_RS05210 (FMM01_05210) frr 1011460..1012020 (-) 561 WP_027827706.1 ribosome recycling factor -
  FMM01_RS05215 (FMM01_05215) pyrH 1012023..1012772 (-) 750 WP_027827705.1 UMP kinase -
  FMM01_RS05220 (FMM01_05220) tsf 1012902..1013777 (-) 876 WP_027827704.1 translation elongation factor Ts -
  FMM01_RS05225 (FMM01_05225) rpsB 1013874..1014710 (-) 837 WP_150391840.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 46110.39 Da        Isoelectric Point: 6.5941

>NTDB_id=371654 FMM01_RS05195 WP_150391837.1 1008536..1009813(-) (eeP) [Schleiferilactobacillus harbinensis strain NSMJ42]
MKGIIAFILVFGIIVLVHEFGHYFFAKWAGILVREFSIGMGPKLFWHRSHGTTYTIRILPLGGYVRMAGAADDEDEIEPG
TMATLVLNDAGVVTSINTSDKVTNVNGVPLQVSKSDLEKELWVEGYENGDESVVKRYPVDHDATIIEHDGTEVQIAPLDV
QFQSASLGRRMLTNFGGPLNNFLLGIITFIIIAFVNGGAPNNSQTMIAQIEPGMPAAQAGFKAKDLVQTVDGQRVGDITD
FSKHLQNKAGKTVKIQVLRNGQTKTLTVKPVARTVDKKQVTQIGVAVTGGLDTSFTAKLKYGFTETWYIITHILQILGSF
FTGGFSLNKLGGPVAIYQASSQAASFGWLSVVTMMASLSVNLGLMNLLPIPALDGGKLLLNVVEAVRGEPISEEKEGVIT
LIGFGLLLLLMIAVTWNDFQRLFTH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=371654 FMM01_RS05195 WP_150391837.1 1008536..1009813(-) (eeP) [Schleiferilactobacillus harbinensis strain NSMJ42]
ATGAAGGGTATTATCGCATTCATCCTGGTCTTTGGGATCATCGTGCTGGTCCATGAATTTGGCCATTACTTCTTCGCCAA
GTGGGCGGGGATCCTGGTCCGGGAATTCTCCATCGGTATGGGGCCCAAGCTGTTCTGGCATCGGTCCCACGGCACGACGT
ATACGATTCGAATCTTACCCTTAGGCGGGTACGTCCGCATGGCCGGCGCGGCCGATGATGAGGACGAAATTGAACCAGGC
ACGATGGCCACCTTGGTGCTGAACGATGCCGGCGTGGTCACCTCGATCAATACCAGTGACAAGGTGACTAATGTCAACGG
TGTGCCGCTGCAAGTGTCCAAGAGTGATTTGGAAAAAGAACTCTGGGTTGAAGGTTACGAAAACGGTGATGAATCGGTGG
TCAAACGCTACCCGGTGGATCACGACGCGACGATCATCGAGCACGACGGTACTGAAGTACAGATCGCCCCGCTGGACGTG
CAGTTCCAGTCGGCCAGTTTGGGCCGCCGGATGCTGACAAACTTTGGCGGGCCGTTGAATAATTTCTTGCTGGGAATCAT
CACGTTTATTATCATCGCTTTCGTCAACGGCGGGGCACCGAATAATAGTCAGACGATGATTGCCCAGATTGAGCCTGGTA
TGCCCGCCGCTCAGGCCGGCTTCAAGGCCAAGGACCTGGTCCAAACGGTGGATGGCCAGCGGGTAGGGGATATTACGGAT
TTTTCTAAACACCTGCAAAACAAGGCTGGCAAAACGGTGAAGATCCAGGTGCTGCGCAACGGCCAAACGAAAACACTGAC
GGTTAAACCGGTCGCGCGTACCGTGGATAAGAAACAAGTGACTCAGATCGGGGTGGCGGTCACCGGCGGTTTAGATACCT
CGTTCACGGCCAAACTAAAATACGGCTTCACGGAGACGTGGTATATCATTACCCACATTCTCCAGATCCTGGGTTCATTC
TTCACCGGCGGCTTCAGCCTGAACAAGCTGGGCGGCCCGGTGGCGATCTACCAAGCGTCCAGTCAGGCGGCCAGCTTCGG
CTGGCTCTCCGTGGTGACGATGATGGCCAGTCTGTCGGTGAACCTGGGCTTGATGAACCTGCTGCCGATTCCGGCGCTGG
ACGGCGGCAAGCTGCTGCTGAATGTCGTCGAGGCCGTGCGGGGCGAACCGATTTCTGAAGAAAAAGAAGGCGTGATCACC
TTGATCGGCTTCGGGTTGCTGCTCCTGTTGATGATTGCAGTCACCTGGAACGATTTCCAACGGTTATTCACGCACTGA

Domains


Predicted by InterproScan.

(203-269)

(6-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.442

100

0.48

  eeP Streptococcus thermophilus LMD-9

47.209

100

0.478


Multiple sequence alignment