Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FLP15_RS11575 Genome accession   NZ_CP041356
Coordinates   2439843..2441636 (-) Length   597 a.a.
NCBI ID   WP_142767237.1    Uniprot ID   A0A514ZAT4
Organism   Lactococcus protaetiae strain KACC 19320     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2434843..2446636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FLP15_RS11560 (FLP15_11560) - 2436764..2437690 (-) 927 WP_142767234.1 peptidyl-prolyl cis-trans isomerase -
  FLP15_RS11565 (FLP15_11565) - 2437834..2438529 (-) 696 WP_142767235.1 O-methyltransferase -
  FLP15_RS11570 (FLP15_11570) - 2438550..2439380 (-) 831 WP_142767236.1 aminoglycoside 6-adenylyltransferase -
  FLP15_RS11575 (FLP15_11575) pepF 2439843..2441636 (-) 1794 WP_142767237.1 oligoendopeptidase F Regulator
  FLP15_RS11580 (FLP15_11580) - 2442272..2443132 (-) 861 WP_142767238.1 HAD-IIB family hydrolase -
  FLP15_RS11585 (FLP15_11585) coiA 2443258..2444250 (-) 993 WP_142767239.1 competence protein CoiA family protein Machinery gene
  FLP15_RS11590 (FLP15_11590) - 2444410..2445495 (-) 1086 WP_142767240.1 YdcF family protein -

Sequence

Protein


Download         Length: 597 a.a.        Molecular weight: 69370.70 Da        Isoelectric Point: 4.7019

>NTDB_id=371506 FLP15_RS11575 WP_142767237.1 2439843..2441636(-) (pepF) [Lactococcus protaetiae strain KACC 19320]
MAKERTEIPEQLTWDLTTIFSTDEAWEEELDCVTGNIEGAEADFAGHLLDSAVTLHEITATMLSISKDVEKLYVYASMKN
DQDTRAAKYQEYQAKATTLYAKFGEAFSFYEPEFLALTTENYQKLLLDEPQLKKYQHYFERLFTKKTHILSQKVEKLLAS
AGEIFGSGAETFEVFDNADVRFPQVKDESGEEIQLTHGNYISLMESKDRIVRENAYKALYSNYEQYQHTYAKTLQTNVKV
HNFNAEVRGYSSAREAALAENFVPEKVYDVLIETVNKYLPLLHRYISLRKEILNLSDLKMYDIYTPLSTLDYKFNYEDGV
KKAQEVLAIFGEDYTRRVKRAFDERWIDVCENVGKRSGAYSGGSYDTNAFMLLNWQETLDDLFTLVHEMGHSMHSTFTRE
NQPYVYGDYPIFLAEIASTTNENILTETLLNETKDDKERFALLNHWLDSFRGTVYRQAQFAEFEQMIHEADAKGQVLTSE
FMNDTYGKLNEKYYGLKAKENLEIQYEWARIPHFYYNFYVFQYSTGFAAATYLAEKIVHGTTENREKYLNYLKAGSSAYP
LDVIAKAGVDMTSAEYLESSFQLFERRLEEFENLVKK

Nucleotide


Download         Length: 1794 bp        

>NTDB_id=371506 FLP15_RS11575 WP_142767237.1 2439843..2441636(-) (pepF) [Lactococcus protaetiae strain KACC 19320]
ATGGCTAAAGAAAGAACTGAAATTCCAGAGCAATTAACTTGGGATTTAACAACGATTTTTTCAACAGATGAGGCTTGGGA
AGAAGAGTTAGATTGCGTTACAGGCAACATTGAGGGGGCAGAAGCAGATTTTGCAGGACATTTATTGGATAGCGCAGTAA
CTTTGCATGAGATAACAGCGACCATGCTTTCAATCTCAAAAGATGTGGAAAAACTCTACGTCTACGCTTCCATGAAAAAT
GACCAAGACACTAGAGCTGCAAAGTACCAAGAATATCAAGCAAAAGCCACAACACTTTACGCAAAATTCGGTGAAGCATT
TTCTTTCTATGAACCAGAATTCCTAGCGTTAACAACTGAAAATTATCAAAAATTATTATTAGACGAGCCTCAATTAAAAA
AATATCAACATTATTTTGAACGATTATTTACCAAAAAAACTCATATTTTGAGCCAAAAAGTGGAAAAACTTCTCGCATCC
GCAGGAGAGATTTTTGGTAGTGGTGCAGAAACATTTGAAGTGTTTGATAATGCAGATGTTCGCTTTCCACAAGTAAAAGA
TGAGTCAGGTGAAGAAATTCAGCTGACTCATGGGAACTATATTTCGCTTATGGAAAGTAAGGATAGAATTGTTCGTGAAA
ATGCTTATAAAGCGCTCTATAGTAACTATGAACAATATCAACATACTTATGCTAAAACCTTACAAACTAATGTGAAAGTT
CATAACTTCAATGCAGAAGTACGGGGCTACTCATCAGCACGTGAAGCAGCTTTGGCAGAAAATTTTGTACCAGAAAAAGT
CTACGATGTGCTTATCGAAACAGTCAATAAATATTTGCCTTTATTACACCGCTATATCTCACTTCGCAAAGAAATCTTGA
ATCTTTCAGATTTAAAAATGTATGATATCTATACACCATTATCAACATTAGACTATAAATTTAACTATGAAGATGGGGTA
AAAAAAGCACAAGAAGTGCTAGCAATTTTTGGAGAAGATTATACCAGACGCGTAAAAAGAGCTTTTGACGAACGTTGGAT
TGATGTATGTGAAAATGTAGGAAAACGTTCAGGCGCTTATTCAGGTGGGTCTTATGATACAAATGCTTTCATGTTGCTCA
ACTGGCAAGAAACATTGGATGACCTGTTTACCCTGGTACATGAGATGGGGCATTCCATGCACAGCACATTTACACGTGAA
AATCAACCTTATGTTTACGGTGATTATCCGATCTTTTTAGCTGAAATTGCTTCAACCACAAATGAAAATATTTTGACTGA
AACATTACTCAATGAAACAAAAGATGATAAAGAACGTTTTGCTTTACTTAATCATTGGCTGGATAGTTTCCGAGGAACAG
TTTATCGTCAAGCACAATTTGCTGAGTTTGAGCAGATGATTCACGAAGCAGATGCTAAAGGTCAAGTTCTCACGAGTGAG
TTTATGAATGATACTTATGGAAAATTAAATGAAAAATATTACGGCTTGAAAGCAAAAGAAAATTTAGAGATTCAGTATGA
ATGGGCAAGAATTCCACATTTTTACTATAATTTCTACGTTTTCCAATATTCTACGGGGTTTGCAGCCGCGACCTACCTTG
CAGAAAAAATTGTTCATGGAACGACAGAAAATCGTGAAAAATATTTGAATTATCTTAAAGCAGGTTCATCCGCTTATCCA
TTAGATGTTATTGCTAAAGCGGGCGTTGACATGACATCCGCAGAGTATCTTGAAAGTTCATTCCAGCTTTTTGAAAGGCG
CCTAGAAGAATTTGAAAATCTCGTAAAAAAATGA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(113-182)

Peptidase family M3 (Peptidase_M3)

(203-582)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A514ZAT4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

64.824

100

0.648

Multiple sequence alignment