Detailed information NTG0371448

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: IHMA87_RS10145
• Genome accession: NZ_CP041354
• Coordinates: 2134918..2137140 (+)
• Length: 740 a.a.
• NCBI ID: WP_034078474.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain AZPAE15042
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2129918..2142140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHMA87_RS10120 (IHMA87_01979)	-	2130211..2130810 (-)	600	WP_034078470.1	PilZ domain-containing protein	-
IHMA87_RS10125 (IHMA87_01980)	-	2130913..2132163 (+)	1251	WP_034078471.1	lipoprotein-releasing ABC transporter permease subunit	-
IHMA87_RS10130 (IHMA87_01981)	lolD	2132156..2132839 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
IHMA87_RS10135 (IHMA87_01982)	-	2132909..2134153 (+)	1245	WP_003156869.1	lipoprotein-releasing ABC transporter permease subunit	-
IHMA87_RS10140 (IHMA87_01983)	-	2134254..2134787 (-)	534	WP_034078473.1	DUF2062 domain-containing protein	-
IHMA87_RS10145 (IHMA87_01984)	comA	2134918..2137140 (+)	2223	WP_034078474.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
IHMA87_RS10150 (IHMA87_01985)	exbB	2137213..2137848 (+)	636	WP_034078476.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
IHMA87_RS10155 (IHMA87_01986)	-	2137845..2138285 (+)	441	WP_012075163.1	ExbD/TolR family protein	-
IHMA87_RS10160 (IHMA87_01987)	lpxK	2138285..2139283 (+)	999	WP_003157521.1	tetraacyldisaccharide 4'-kinase	-
IHMA87_RS10165 (IHMA87_01988)	-	2139321..2139506 (+)	186	WP_003157522.1	Trm112 family protein	-
IHMA87_RS10170 (IHMA87_01989)	kdsB	2139506..2140270 (+)	765	WP_012075164.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IHMA87_RS10175 (IHMA87_01990)	-	2140270..2140734 (+)	465	WP_012075165.1	low molecular weight protein-tyrosine-phosphatase	-
IHMA87_RS10180 (IHMA87_01991)	murB	2140731..2141750 (+)	1020	WP_034078478.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 79672.10 Da
• Isoelectric Point: 10.9818

>NTDB_id=371448 IHMA87_RS10145 WP_034078474.1 2134918..2137140(+) (comA) [Pseudomonas aeruginosa strain AZPAE15042]
MRLGLPALAAGLLALRLLPELPSAGWLLAAAAAGLLLLFGRLYWLGLFLLGFAWACVSAQAALDGRLAAELDGRTLWLEG
RISGLPVSGNGVTRFQLEDVSSPREALPARLRLSWRGAPPLMGGERWRLAVNLKRPRGLVNTAGFDYEAWLLAQRIGAIG
TVKAGERLRPASGLDAWRDAWRQRLLAADTQGRGGALAALVLGDGSGLRADEWRMLQDTGTVHLMVISGSHISLLAGMLY
GLVAGLFRLGCWPRRLPWLPCACGLALAGAWGYGLMAGFEVPVRRACLMVSLALLWRLRFRHLGVSRPLLGTLVLVLLAE
PLACLQAGFWLSFLAVALLLWLFAGRLGRWRWWTAWGRAQWGMALGLAIPSLALGLPLSLSGALANLLAVPWVEMLVVPP
ALAGSLLLGVPGVGESLLWIAGASLDQLFRLLVLLAGLAGAWQPPAATAWGVALGMLGALCWLAPAGLPVRGLGALLMLP
ALAPSLRPIEAGYAEVRMLDVGQGLAVLLRTRGHALLYDAGARQGDFDMGERVVLPVLRSLDLRRLDGLLLSHADNDHAG
GAPAVVSRFAPGWVVSGEPARLPSSLAARGCAERRWEWDGVTFAQWSWARADSANDRSCVLRVEARGEVLLLTGDIARAA
EYAWLARQGEPRVDWLQAPHHGSRSSSGEAFVRRTRPRHVLVSRGWRNAFGHPHAEVVQRYSGIAAQIHDTARDGALTFT
LGRGGEARGEREAAHFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=371448 IHMA87_RS10145 WP_034078474.1 2134918..2137140(+) (comA) [Pseudomonas aeruginosa strain AZPAE15042]
ATGCGCCTGGGATTGCCAGCTCTCGCCGCGGGGCTGCTGGCCCTGCGCCTGCTGCCGGAGTTGCCGTCGGCTGGCTGGTT
GCTGGCGGCGGCCGCCGCCGGTCTGCTGCTGCTCTTCGGCCGTCTCTACTGGCTGGGTCTGTTCCTGCTCGGCTTCGCCT
GGGCCTGCGTGTCGGCACAGGCCGCGCTGGACGGGCGCCTCGCCGCCGAGCTGGATGGCCGGACGCTATGGCTGGAAGGG
CGTATCAGCGGCCTGCCGGTAAGCGGGAATGGCGTCACGCGCTTCCAGTTGGAGGACGTGAGCAGCCCGCGCGAAGCGCT
GCCTGCCCGCCTACGCCTGAGCTGGCGCGGCGCGCCGCCCCTCATGGGGGGTGAGCGCTGGCGCCTGGCGGTGAACCTGA
AGCGGCCGCGCGGCCTGGTGAATACGGCGGGCTTCGATTACGAAGCCTGGCTACTGGCGCAGCGGATCGGCGCCATCGGC
ACGGTGAAGGCGGGCGAGCGGTTGCGTCCGGCCAGCGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGTCTGCTCGC
GGCGGATACCCAGGGTCGCGGCGGCGCGCTGGCGGCGCTGGTGCTGGGAGACGGCTCGGGCTTGCGCGCGGATGAATGGC
GCATGCTCCAGGACACCGGCACCGTGCACCTGATGGTGATTTCCGGATCGCATATCTCGCTGCTGGCGGGAATGCTCTAT
GGCCTGGTGGCGGGCCTGTTCCGCCTGGGTTGCTGGCCTCGCCGCCTGCCCTGGCTGCCCTGCGCCTGCGGCCTGGCGCT
GGCTGGTGCCTGGGGCTACGGGCTGATGGCGGGATTCGAGGTGCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGGCGC
TGCTCTGGCGCTTGCGCTTCCGTCACCTGGGCGTGTCGAGGCCGCTGCTCGGGACGCTGGTGCTGGTGCTCCTGGCGGAG
CCGCTGGCCTGCCTGCAGGCGGGATTCTGGCTGTCGTTCCTGGCGGTGGCGCTGCTGCTCTGGCTGTTCGCCGGGCGCCT
CGGGCGCTGGCGCTGGTGGACGGCCTGGGGGCGGGCGCAATGGGGCATGGCGCTGGGGCTGGCGATACCGTCGCTGGCGC
TGGGCTTGCCGTTGAGCCTGAGCGGGGCGCTGGCGAACCTGCTGGCGGTGCCCTGGGTAGAAATGCTGGTAGTGCCGCCG
GCCCTGGCCGGGAGCCTGTTGCTCGGTGTGCCTGGCGTGGGCGAGAGCCTGTTGTGGATCGCTGGCGCCTCGCTGGACCA
ACTGTTCCGCCTGCTCGTCCTGCTGGCGGGGCTGGCCGGGGCCTGGCAGCCGCCTGCCGCCACGGCCTGGGGCGTCGCCC
TGGGAATGCTCGGCGCGCTCTGCTGGCTGGCGCCAGCCGGGTTGCCGGTGCGAGGCCTGGGGGCGTTGCTGATGCTACCG
GCGCTGGCGCCGTCGCTGCGACCGATCGAGGCGGGGTATGCCGAGGTGCGGATGCTGGATGTCGGCCAGGGGCTGGCGGT
GCTGCTGCGTACCCGCGGGCACGCGCTGCTGTATGACGCCGGTGCGCGACAGGGCGACTTCGACATGGGCGAGCGGGTGG
TCCTGCCGGTGCTGCGCAGTCTCGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGCCACGCCGACAACGACCATGCCGGT
GGCGCGCCTGCGGTGGTTTCCCGTTTCGCCCCGGGCTGGGTGGTCAGTGGCGAGCCGGCGCGCCTGCCGTCGTCGCTGGC
GGCGCGGGGATGCGCGGAGCGGCGCTGGGAGTGGGACGGTGTGACCTTCGCCCAGTGGTCATGGGCCCGGGCCGACAGCG
CTAACGACCGTTCCTGCGTGTTGCGGGTGGAAGCGCGCGGCGAGGTGCTGCTGCTGACCGGCGACATCGCGCGCGCTGCC
GAGTACGCCTGGCTGGCGCGCCAGGGCGAGCCGCGGGTCGACTGGTTGCAGGCGCCACATCATGGCAGTCGCAGTTCCTC
CGGAGAGGCCTTCGTGCGACGGACCCGGCCGCGCCATGTGCTGGTCTCGCGGGGTTGGCGCAATGCCTTCGGCCATCCTC
ATGCGGAGGTGGTGCAGCGCTACTCCGGCATCGCCGCGCAGATCCACGACACCGCTCGCGACGGAGCGCTGACCTTTACC
CTGGGGCGCGGCGGGGAGGCACGCGGGGAGCGTGAAGCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Competence protein (Competence) (200-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-677)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.444	97.297	0.578
comA	Ralstonia pseudosolanacearum GMI1000	35.241	100	0.366