Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   FK538_RS05150 Genome accession   NZ_CP041295
Coordinates   1068046..1068750 (-) Length   234 a.a.
NCBI ID   WP_005177031.1    Uniprot ID   A0A6C0Y3U4
Organism   Acinetobacter indicus strain 80-1-2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1063046..1073750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FK538_RS05125 (FK538_05135) - 1063154..1064473 (+) 1320 WP_168370442.1 adenylosuccinate synthase -
  FK538_RS05130 (FK538_05140) - 1064610..1065395 (+) 786 WP_104489706.1 M48 family metallopeptidase -
  FK538_RS05135 (FK538_05145) - 1065484..1065792 (+) 309 WP_104472979.1 hypothetical protein -
  FK538_RS05140 (FK538_05150) - 1065955..1066737 (+) 783 WP_075166668.1 M48 family metallopeptidase -
  FK538_RS05145 (FK538_05155) - 1066826..1067875 (-) 1050 WP_075166669.1 NADP(H)-dependent aldo-keto reductase -
  FK538_RS05150 (FK538_05160) crp 1068046..1068750 (-) 705 WP_005177031.1 cAMP-activated global transcriptional regulator CRP Regulator
  FK538_RS05155 (FK538_05165) - 1068898..1069320 (+) 423 WP_005177032.1 OsmC family protein -
  FK538_RS05160 (FK538_05170) clpB 1069646..1072225 (+) 2580 WP_005177034.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26315.89 Da        Isoelectric Point: 4.6470

>NTDB_id=371042 FK538_RS05150 WP_005177031.1 1068046..1068750(-) (crp) [Acinetobacter indicus strain 80-1-2]
MTSNFSQLSTDALSPGQLPDSVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDDREIVVAYLNPGDF
FGEMGLFEANPQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEQNDAADEQFDDE

Nucleotide


Download         Length: 705 bp        

>NTDB_id=371042 FK538_RS05150 WP_005177031.1 1068046..1068750(-) (crp) [Acinetobacter indicus strain 80-1-2]
ATGACTTCAAACTTTTCACAATTAAGCACCGATGCCCTGTCTCCTGGTCAATTACCAGATTCAGTCAAGGCATTATTAAA
ACGTGCATATATCAACCGTTATCCGAAACGGACAACAATTGTTGATGCGGGGTCTGAATCAAAATCACTTTATTTGATTC
TGAAAGGATCTGTTTCCATCATTCTGCGTGAAGATGATGATCGCGAAATTGTTGTGGCGTATTTGAATCCAGGTGACTTC
TTTGGGGAAATGGGTCTATTCGAAGCAAATCCACAACGTACTGCAGAAGTACGCACACGTGACGTTTGTGAAATTGCCGA
AGTGACTTATGAAAACTTCCACGAACTCAGCAAGCAATATCCAGATTTAAGCTATGCGGTATTTGCCCAGCTGGTGCGCC
GTTTAAAAAATACCACGCGTAAAGTGACCGATCTGGCCTTCATTGATGTTTCAGGCCGTATTGCCCGTTGTCTGATTGAC
CTGTCTGCGCAGCCTGAAGCCATGATTTTGCCAAATGGCCGTCAAATCCGCATTACCCGTCAGGAAATTGGCCGCATTGT
TGGCTGTTCACGTGAAATGGTCGGCCGTGTTCTGAAAACCCTGGAAGAACAAGGCATGATCGAAACTGATGGTAAAGCCA
TTCTGATTTTTGATGCCTCTTTAGAGCAAAATGATGCAGCAGATGAACAGTTTGATGATGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C0Y3U4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.026

100

0.91
  crp Vibrio cholerae strain A1552

46.829

87.607

0.41
  crp Haemophilus influenzae Rd KW20

47.179

83.333

0.393

Multiple sequence alignment