Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FK537_RS11885 Genome accession   NZ_CP041291
Coordinates   2394718..2399211 (+) Length   1497 a.a.
NCBI ID   WP_168370084.1    Uniprot ID   -
Organism   Acinetobacter indicus strain 94-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2389718..2404211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FK537_RS11860 (FK537_11925) - 2390212..2390853 (-) 642 WP_075167117.1 hypothetical protein -
  FK537_RS11865 (FK537_11930) pilG 2391135..2391518 (+) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  FK537_RS11870 (FK537_11935) - 2391535..2391903 (+) 369 WP_005179539.1 PleD family two-component system response regulator -
  FK537_RS11875 (FK537_11940) - 2391907..2392443 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  FK537_RS11880 (FK537_11945) - 2392489..2394561 (+) 2073 WP_075167116.1 methyl-accepting chemotaxis protein -
  FK537_RS11885 (FK537_11950) chpA 2394718..2399211 (+) 4494 WP_168370084.1 Hpt domain-containing protein Regulator
  FK537_RS11890 (FK537_11955) - 2399208..2399669 (+) 462 WP_075167114.1 hypothetical protein -
  FK537_RS11895 (FK537_11960) dapE 2399739..2400872 (-) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  FK537_RS11900 (FK537_11965) - 2401000..2401146 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  FK537_RS11905 (FK537_11970) - 2401247..2402149 (-) 903 WP_168370085.1 DUF1853 family protein -
  FK537_RS11910 (FK537_11975) - 2402240..2402629 (+) 390 WP_168370086.1 YbaN family protein -
  FK537_RS11915 (FK537_11980) elsL 2402626..2403156 (+) 531 WP_005179524.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1497 a.a.        Molecular weight: 166725.08 Da        Isoelectric Point: 4.2834

>NTDB_id=371018 FK537_RS11885 WP_168370084.1 2394718..2399211(+) (chpA) [Acinetobacter indicus strain 94-2]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAVDAELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDQIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSSETGTTEAVTETAET
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLAGIDQDVNSWSQDSSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMNASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDASALEFELEPAPAETAYAAPEDEQQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDNL
HLIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSN
AYDALLNTTVAWLKEAIFQREYSNFDSLKASLESIEYVNATAQLPERFNTADLLAPSKTFEFVQGDGAEPPSMQGEWSET
AQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSR
YTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIV
RQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTD
DGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGT
TFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSN
IAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHV
MEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRH
HDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=371018 FK537_RS11885 WP_168370084.1 2394718..2399211(+) (chpA) [Acinetobacter indicus strain 94-2]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGTTTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCACTGGATC
TGCGTCCATTGGTGCTGTTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCCTTAGAAGAACTTCTACAACTG
GCGAGCAGCTTAACATCCAGCGACAGTATTACTGGTCTGGAGTTTGATACAGCAAGCACTGATGAGCAGGTTGCTGTAGA
TGCCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCAG
AAGAACACCTGTTAACGGTGGACCGCTTCCTGGCACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACCTCCAAAGAAACCGCACTGTTATTACAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCAGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGCGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGACAACGCGTCAGCTTAAGCGAAGACGCCCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCTCAGAAACTGGCACCACAGAAGCTGTAACCGAAACGGCTGAAACC
GGTGCAGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAAGCCGAAGAGTTACTCGCGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACTCGAGCAATACTGCTGCACTGAACAATCTGATGCGCCATCTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACTATTTATGAGCGCATCATTAACCGTCAAATGAA
TGCATCGACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AAGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTTGAATTTGAGTT
GGAACCAGCACCTGCAGAAACAGCCTATGCTGCGCCTGAAGATGAGCAGCAGCCAGATACTAGCAGCGAACCGGTACTGG
AAGATGCACCGACCCTGGCTGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAATCTG
CATTTGATTGTGGAAGAAACCTTCCTGGAAGAAGCCGAAGAGCTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTGGTT
TGACCATCGTAGTGACCGGAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGGCCG
AAATCGAGCCGGTGGCCGTGATTGCCTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTCAATTCCAAT
GCCTATGATGCCTTGCTCAACACCACTGTGGCCTGGTTAAAAGAAGCCATCTTCCAGCGCGAATACAGCAATTTTGACAG
CCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTCAATACTGCCGATCTGC
TGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAAACC
GCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGAAAA
CGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAAC
GTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCACGC
TATACCGACTTCGACCCGCTGGAGATGGACCAGTATTCATCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGCGTC
GGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCTGAAGGTCTGTTACTGCAACAGTCGCGGATTC
AGGCAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTG
CGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACTATTCT
GGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGTCTGGAAGATGCCGCTGTACGTAAAC
AGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACCGAT
GATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAACAGCTGGA
CAAGAAAGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAGGCCGTGACCCAGATTTCGGGTCGTGGCG
TCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGCACT
ACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGCAAT
TCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACTACT
TCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTGCCGCGTTTAAGCAAT
ATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGATTGG
TTCACGTGGCCAGATTGTGATGAAACCGATTGGCCAGCAGTTCTCCAGCGTGGGTTCGATTGCCGGCGCGACCATTCTCG
GTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCATGTG
ATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAAGGT
CACGTCACGTCTGCTCGAGCGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGGAAA
ATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGCCAC
CATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTT
GGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTG
AGGCTAAAGCATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1073-1208)

Hpt domain (Hpt)

(726-790)

Hpt domain (Hpt)

(512-598)

Hpt domain (Hpt)

(204-284)

Hpt domain (Hpt)

(25-111)

Response regulator receiver domain (Response_reg)

(1375-1486)

CheW-like domain (CheW)

(1215-1350)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.038

100

0.621

Multiple sequence alignment