Detailed information NTG0370998

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FK537_RS06960
• Genome accession: NZ_CP041291
• Coordinates: 1362025..1363380 (+)
• Length: 451 a.a.
• NCBI ID: WP_171525655.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain 94-2
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1357025..1368380

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FK537_RS06940 (FK537_07010)	thrC	1357197..1358342 (+)	1146	WP_005181581.1	threonine synthase	-
FK537_RS06945 (FK537_07015)	-	1358435..1359517 (-)	1083	WP_168369800.1	serine hydrolase	-
FK537_RS06950 (FK537_07020)	-	1359735..1360370 (+)	636	WP_005181577.1	response regulator	-
FK537_RS06955 (FK537_07025)	pilS	1360385..1361953 (+)	1569	WP_168369801.1	sensor histidine kinase	Regulator
FK537_RS06960 (FK537_07030)	pilR	1362025..1363380 (+)	1356	WP_171525655.1	sigma-54-dependent transcriptional regulator	Regulator
FK537_RS06965 (FK537_07035)	-	1363397..1364566 (-)	1170	WP_005181572.1	S41 family peptidase	-
FK537_RS06970 (FK537_07040)	gpmI	1364590..1366137 (-)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
FK537_RS06975 (FK537_07045)	lptG	1366256..1367326 (-)	1071	WP_005181568.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50611.31 Da
• Isoelectric Point: 6.6716

>NTDB_id=370998 FK537_RS06960 WP_171525655.1 1362025..1363380(+) (pilR) [Acinetobacter indicus strain 94-2]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAYSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAITLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=370998 FK537_RS06960 WP_171525655.1 1362025..1363380(+) (pilR) [Acinetobacter indicus strain 94-2]
ATGCAAATGACATTGGCGCGCATGGGAATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGATGCTTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCATATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTACGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGTAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGTGCCATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGCGCGGCGCAGGACAAACAGGGCCTGATCCAGTCAGCGCACG
GCGGCAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAATTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGCGCCAGCCATCAGGACCTGGAAGC
ATTAGTCCAGCAAGGTCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGTTGCCACCGCTACGTG
AGCGTGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATTATTGAACG
CGCCATAACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAAACTGCACCCTTACGCAAGATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCCGATGCCCTGCCTGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATTGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACCCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTGAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.279	100	0.743
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501