Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   AhaeAN54_RS05985 Genome accession   NZ_CP041224
Coordinates   1239101..1241539 (+) Length   812 a.a.
NCBI ID   WP_118902247.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain AN54     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1234101..1246539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN54_RS05950 (AhaeAN54_005950) - 1234311..1234781 (+) 471 WP_004640146.1 YaiI/YqxD family protein -
  AhaeAN54_RS05955 (AhaeAN54_005955) - 1234789..1235307 (+) 519 Protein_1141 DMT family transporter -
  AhaeAN54_RS05960 (AhaeAN54_005960) - 1235339..1236040 (-) 702 WP_001223318.1 IS1-like element ISPa14 family transposase -
  AhaeAN54_RS05965 (AhaeAN54_005965) - 1236101..1236478 (+) 378 Protein_1143 EamA family transporter -
  AhaeAN54_RS05970 (AhaeAN54_005970) - 1236493..1237077 (-) 585 WP_004640143.1 PilZ domain-containing protein -
  AhaeAN54_RS05975 (AhaeAN54_005975) - 1237103..1238338 (+) 1236 WP_005084477.1 lipoprotein-releasing ABC transporter permease subunit -
  AhaeAN54_RS05980 (AhaeAN54_005980) lolD 1238331..1239017 (+) 687 WP_075315118.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  AhaeAN54_RS05985 (AhaeAN54_005985) comA/comEC 1239101..1241539 (+) 2439 WP_118902247.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  AhaeAN54_RS05990 (AhaeAN54_005990) - 1241528..1242484 (-) 957 WP_118901718.1 lysophospholipid acyltransferase family protein -
  AhaeAN54_RS05995 (AhaeAN54_005995) sppA 1242624..1243646 (+) 1023 WP_005084487.1 signal peptide peptidase SppA -
  AhaeAN54_RS06000 (AhaeAN54_006000) - 1243793..1244590 (+) 798 WP_005084488.1 alpha/beta fold hydrolase -
  AhaeAN54_RS06005 (AhaeAN54_006005) purN 1244637..1245266 (-) 630 WP_171456280.1 phosphoribosylglycinamide formyltransferase -
  AhaeAN54_RS06010 (AhaeAN54_006010) purM 1245263..1246333 (-) 1071 WP_005089611.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 812 a.a.        Molecular weight: 93487.60 Da        Isoelectric Point: 8.8541

>NTDB_id=370677 AhaeAN54_RS05985 WP_118902247.1 1239101..1241539(+) (comA/comEC) [Acinetobacter haemolyticus strain AN54]
MLKIILLGWVAGIALMGMHFPIITSTWWLWLIIAFAIFGFGFYWKKQYFHYPTYKALFLISATWALFCTGYHYADIQLQQ
RLIFKEQNVETFEAIVYIKKISELNENGEKQVAEVLNRHAQSVNWFLHLRKEKDTSKVEPEFQLGHYYRVSGQIRPAHSY
AVPGAFDLEKWFLQQNVQSGFSVRNIQPIHEDELYQLGYHHHLQQQQSHWAIFLLAVEKKRLAFRQMLQASAFQHKGLLL
ALLTGDESLLSDAVKQQFQHLGISHLLAISGPHVLVFALILTWSLQKLIQRYCPSIYLKQPRQLLLLLPFIFSVLLYVAF
VGFEIPAMRTLLTVSIVSTFMCLRQSIQAFSVLVYSASLLLVFDPFSILSAAFWLSYGACFILIRIYQTIIQLPQNVNLT
FKRKMIWGSHILIESQWKIFVALLPLVLIFFQQVSWFAPLTNLIAIPLLGACIVPLDILAACVWLIIPILGQWLFQMNDV
FLSFLMLILDVLQSISPQLYGISFTPWMMVSLIIGIFLLFLPRGIVPKFWAAVCFLPILWGVKAQPEALHVLDVGQGQAV
LVQHTKGNLLIDTGGSFDETKFSMGERVVIPFLRQQGIRRLEHVVLSHLDQDHSGAFTSIQNSFEIDLVQSNEKHEKMQF
KENFSFCQQGQQWLFPNINIQILFPRANELSYAKYQKNEYSCVLYVQFLDAQPYQNFLIMGDAGWETEYKLLQQYPDLKV
DVLILGHHGSKHSSAYEFLATLQPKLTIASAGFNNRYGHPSQEVLKRLQHLNIPILNTADAGTISFMMNNHDGVLLQHRQ
KRKWLSKNSLSN

Nucleotide


Download         Length: 2439 bp        

>NTDB_id=370677 AhaeAN54_RS05985 WP_118902247.1 1239101..1241539(+) (comA/comEC) [Acinetobacter haemolyticus strain AN54]
ATGCTAAAAATTATTTTATTGGGGTGGGTTGCGGGTATCGCACTTATGGGAATGCATTTCCCGATCATTACATCTACATG
GTGGCTTTGGCTGATTATTGCATTCGCGATCTTTGGTTTCGGATTTTATTGGAAAAAGCAGTATTTTCATTATCCTACTT
ATAAAGCCTTGTTTTTAATCAGTGCGACTTGGGCATTATTCTGCACAGGTTATCATTATGCTGATATTCAATTACAACAA
CGTCTTATTTTTAAAGAACAAAATGTTGAAACATTTGAAGCCATTGTTTATATCAAAAAGATCAGTGAACTGAATGAAAA
TGGCGAGAAACAAGTTGCTGAGGTTTTGAATCGACATGCACAAAGTGTGAATTGGTTTCTTCATTTAAGAAAAGAAAAAG
ACACATCTAAAGTAGAACCAGAATTTCAATTGGGTCATTACTATCGTGTATCTGGGCAAATTCGACCCGCCCATAGTTAT
GCCGTCCCTGGCGCATTCGATCTGGAAAAATGGTTTTTACAACAAAATGTGCAGTCGGGATTTTCTGTACGAAATATTCA
ACCTATTCATGAAGATGAACTCTATCAGCTGGGTTATCATCATCATTTGCAGCAACAACAATCTCATTGGGCCATATTCT
TATTAGCTGTTGAAAAAAAGCGTCTGGCTTTTCGACAAATGCTACAGGCATCAGCATTCCAACATAAAGGGTTGCTATTG
GCTTTGCTCACAGGGGATGAGAGTCTGTTATCTGATGCCGTAAAACAACAATTTCAACACCTTGGGATTTCACATTTATT
GGCTATTTCTGGACCCCATGTGTTGGTATTTGCATTGATACTGACTTGGTCATTACAAAAGTTGATTCAGCGCTACTGCC
CAAGCATCTATTTGAAGCAACCTCGACAATTACTACTATTGTTGCCCTTTATCTTTAGTGTCTTGTTATATGTGGCATTT
GTTGGGTTTGAAATTCCAGCAATGAGAACATTATTAACCGTTAGCATTGTCAGTACTTTTATGTGCTTAAGACAGTCGAT
TCAGGCATTTAGTGTGTTGGTTTATAGTGCGAGCTTATTATTAGTTTTTGATCCATTTAGCATTTTATCTGCTGCATTTT
GGTTATCTTATGGCGCCTGTTTTATTTTGATAAGAATCTATCAGACGATTATACAGTTACCACAAAATGTAAATTTAACA
TTTAAACGAAAAATGATCTGGGGCAGTCATATTCTGATTGAATCGCAATGGAAAATTTTTGTCGCGTTATTGCCTTTGGT
TTTGATTTTCTTTCAGCAAGTTTCATGGTTTGCCCCCTTAACTAATCTTATTGCAATCCCATTATTAGGTGCTTGTATTG
TTCCTTTAGATATTCTTGCGGCATGTGTTTGGTTAATCATTCCTATATTGGGGCAGTGGTTATTTCAAATGAATGATGTG
TTCTTGTCATTCTTGATGCTGATTTTAGATGTACTTCAATCGATTTCGCCGCAGTTGTATGGGATAAGTTTCACCCCTTG
GATGATGGTGAGTTTAATTATAGGTATTTTTCTATTGTTTTTGCCTAGAGGTATTGTTCCAAAGTTTTGGGCTGCTGTCT
GTTTCTTACCGATATTATGGGGTGTAAAAGCTCAACCCGAAGCATTGCACGTATTAGATGTTGGTCAAGGACAAGCTGTC
TTAGTACAACATACCAAAGGTAATCTCCTGATTGATACTGGTGGATCATTTGATGAAACCAAATTCAGTATGGGGGAGCG
AGTGGTTATTCCTTTTCTACGTCAGCAAGGTATTCGGCGATTGGAACACGTTGTGTTATCTCATTTGGATCAAGATCATA
GTGGAGCATTTACGTCGATTCAGAATAGTTTTGAAATTGATTTGGTTCAATCGAATGAAAAGCATGAAAAAATGCAATTT
AAGGAGAATTTTTCATTTTGCCAACAAGGACAACAGTGGTTATTTCCAAACATCAACATCCAAATTTTATTTCCTCGAGC
CAATGAATTGAGCTATGCGAAATATCAGAAAAATGAATATTCTTGTGTGCTCTATGTGCAATTTTTAGATGCTCAACCTT
ATCAGAACTTTTTGATTATGGGGGATGCAGGCTGGGAAACCGAATATAAATTGTTACAGCAGTATCCAGATTTAAAAGTC
GATGTGTTAATTCTTGGTCATCATGGCAGTAAGCATAGCTCTGCTTACGAATTTTTGGCAACCCTCCAGCCCAAACTTAC
AATTGCTTCTGCGGGATTTAATAATCGTTACGGACATCCCAGTCAGGAGGTTTTGAAACGATTGCAGCACTTAAATATTC
CAATATTAAATACAGCAGATGCGGGTACGATTAGCTTTATGATGAATAATCATGATGGGGTGTTGCTACAGCATCGACAA
AAAAGAAAATGGTTATCCAAAAATAGCCTAAGTAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

54.815

99.754

0.547

  comA/comEC Acinetobacter baumannii strain A118

54.321

99.754

0.542

  comA/comEC Acinetobacter baylyi ADP1

50.494

99.754

0.504


Multiple sequence alignment