Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   FIM06_RS15360 Genome accession   NZ_CP041144
Coordinates   3067831..3070122 (-) Length   763 a.a.
NCBI ID   WP_140995956.1    Uniprot ID   -
Organism   Bacillus velezensis strain UCMB5044     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3062831..3075122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIM06_RS15320 (FIM06_2850) - 3063291..3063722 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  FIM06_RS15325 (FIM06_2851) - 3063722..3064063 (+) 342 WP_082998530.1 Na(+)/H(+) antiporter subunit C -
  FIM06_RS15330 (FIM06_2852) - 3064056..3065537 (+) 1482 WP_105937379.1 Na+/H+ antiporter subunit D -
  FIM06_RS15335 (FIM06_2853) - 3065543..3066019 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  FIM06_RS15340 (FIM06_2854) - 3066019..3066303 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  FIM06_RS15345 (FIM06_2855) mnhG 3066287..3066661 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  FIM06_RS15350 (FIM06_2856) - 3066701..3067084 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  FIM06_RS15355 (FIM06_2857) comA 3067106..3067750 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  FIM06_RS15360 (FIM06_2858) comP 3067831..3070122 (-) 2292 WP_140995956.1 histidine kinase Regulator
  FIM06_RS15365 comX 3070134..3070298 (-) 165 WP_007613432.1 competence pheromone ComX -
  FIM06_RS15370 (FIM06_2859) - 3070298..3071209 (-) 912 WP_079891857.1 polyprenyl synthetase family protein -
  FIM06_RS15375 (FIM06_2860) degQ 3071362..3071502 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  FIM06_RS15385 (FIM06_2862) - 3071968..3072309 (+) 342 WP_007613435.1 hypothetical protein -
  FIM06_RS15390 (FIM06_2863) - 3072316..3073539 (-) 1224 WP_032876792.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88414.59 Da        Isoelectric Point: 7.3985

>NTDB_id=369770 FIM06_RS15360 WP_140995956.1 3067831..3070122(-) (comP) [Bacillus velezensis strain UCMB5044]
MKSKYNKVSVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYGFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTIEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=369770 FIM06_RS15360 WP_140995956.1 3067831..3070122(-) (comP) [Bacillus velezensis strain UCMB5044]
ATGAAGTCCAAGTACAATAAGGTTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATTA
AAATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGATCGGCAAAAGGCGATTTGCTTAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGGATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTATGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGGGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTATTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAA
GAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

54.026

100

0.545

Multiple sequence alignment