Detailed information    

insolico Bioinformatically predicted

Overview


Name   addA   Type   Machinery gene
Locus tag   FJM75_RS21635 Genome accession   NZ_CP041063
Coordinates   4219955..4223668 (+) Length   1237 a.a.
NCBI ID   WP_166001370.1    Uniprot ID   -
Organism   Bacillus sp. Cs-700     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4214955..4228668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FJM75_RS21615 - 4215501..4215767 (-) 267 WP_098443060.1 spore coat protein CotJB -
  FJM75_RS21620 - 4215771..4215986 (-) 216 WP_098443061.1 spore coat associated protein CotJA -
  FJM75_RS21625 - 4216098..4216292 (-) 195 WP_098443062.1 hypothetical protein -
  FJM75_RS21630 addB 4216474..4219965 (+) 3492 WP_166001368.1 helicase-exonuclease AddAB subunit AddB Machinery gene
  FJM75_RS21635 addA 4219955..4223668 (+) 3714 WP_166001370.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  FJM75_RS21640 - 4223731..4224891 (+) 1161 WP_166001372.1 exonuclease SbcCD subunit D -
  FJM75_RS21645 - 4224907..4228254 (+) 3348 WP_166001374.1 SMC family ATPase -

Sequence


Protein


Download         Length: 1237 a.a.        Molecular weight: 143117.46 Da        Isoelectric Point: 5.0397

>NTDB_id=369264 FJM75_RS21635 WP_166001370.1 4219955..4223668(+) (addA) [Bacillus sp. Cs-700]
MITKPEGSRWTDEQWEAIASRNQDVLVAAAAGSGKTAVLVERIIRRLADEKDPAEVDRILVVTFTNAAAAEMRHRIGEAL
EEKLKEDPSSLYLRRQLSMLNRASISTLHSFCMEVLRRYYYKIDLDPAFRVADQTEAALLREEAMEELFEEHYSQKENEA
FYDLVDRYSSDRSDVDLQLLVERLFHFSSSHPWPKQWLADSVDLYKHAGNKSFDELIWVEELKKDVVLQLEGMREVQEKA
ISISSSPGGPEPYLSTLEVEHEMVNGLLQASKESWAALKKAFEAVSFGRLKPCKGDQFDPELIDTVKGMRDRVKKTVQSM
KEDLFQREAEEYLEDIKKLAPVLETLASLVNEFRDKYTDLKKEKGLVDYSDLEHYCLSILLDEASTPDNPIASNAAKEYQ
TQFAEVLIDEYQDTNSVQETILNAISQTSENGGNRFMVGDVKQSIYRFRLAEPGLFLAKYKSFGRSSEEPTKRIDLARNF
RSREEVLNSTNFIFKQIMDERVGEIKYDHAAELIPGAEYPKSQTVVPEVHVIDQSSDVEEDQEVEKVQLEARLIASNIKS
MMGKSENERTKIYDRKEDRMRPIQYRDMVILMRATSSWAPVMMEELKQAGIPSYSDLATGYFEATEVAIMMSLLNVIDNP
YQDIPLASVLRSPIIGLSEEELALIRINEKQSSYYLAMQAYCETESNELSEKIAQFIDDLNRWREQARQSSLSELIWQLY
RETNYYEFVGGMPAGLQRQANLRALYDRARQYEATSFRGLFRFLRFIDRMKERGSDLGTARALGEQEDVVRVMTIHKSKG
LEFPVVFVAGIAKQFNMRDMANQMLLHKEFGLATKYIDPINRISYPTLPYFTLQKRMKLELLAEEMRVLYVALTRAKEKL
ILVGTVNDWEKELLSWAEAPGEEWLLSDYERSTSKTYLNWIGPAIIRHQDLSSITEGVASFPKHDEVFHHPSRWSLTLHQ
ASDFSQIEAEDVKKHEEYEELLRRKAYVPEESAFKDVVYNRLNWTYPHQAAAETRSKQSVTEVKRQREIFQDERSDDRLV
KGFSQSLKERPRFLQSKKLTPAERGTAMHIVMQHIDLHQRHEEKDIKELIAKLETKELLTNDQAQAIDVKQIKHLIDSDL
GDKMRNASEIYKEVPFSLGVDSKWIYPEFKGEQETVVLQGVIDCILRDQHGELLLVDYKTDVIKNRFSSEQQAMETMKRR
YTTQLQLYEKAINEIWGLPCKEKILFFFDGGKSLLID

Nucleotide


Download         Length: 3714 bp        

>NTDB_id=369264 FJM75_RS21635 WP_166001370.1 4219955..4223668(+) (addA) [Bacillus sp. Cs-700]
ATGATAACTAAACCTGAAGGATCAAGATGGACCGATGAGCAGTGGGAAGCCATTGCTTCAAGAAATCAAGATGTTTTAGT
AGCCGCTGCTGCAGGCTCTGGGAAAACCGCTGTTTTAGTTGAACGAATTATAAGACGTTTAGCCGATGAAAAAGATCCGG
CTGAAGTTGATCGGATTCTAGTCGTAACATTTACAAATGCTGCAGCTGCGGAAATGCGCCACCGCATTGGAGAAGCGCTT
GAAGAAAAGCTGAAGGAAGATCCTTCTTCGCTATACTTAAGAAGACAGCTTTCCATGTTAAATCGTGCTTCTATTTCTAC
ACTACATTCGTTTTGTATGGAAGTTCTTCGCCGCTATTATTACAAAATCGATCTTGATCCTGCGTTTCGAGTCGCCGATC
AAACGGAAGCCGCTTTACTTCGTGAAGAAGCGATGGAAGAGCTCTTTGAAGAGCATTACAGTCAAAAAGAAAATGAAGCA
TTTTATGATCTCGTCGACCGCTATAGTAGTGATCGGAGTGATGTCGATCTTCAGCTTCTAGTTGAACGACTTTTTCATTT
CTCTTCAAGTCATCCTTGGCCGAAACAGTGGTTGGCAGATAGTGTAGATTTATATAAACATGCAGGTAATAAAAGCTTCG
ATGAGCTGATCTGGGTAGAGGAATTAAAGAAAGATGTTGTGCTTCAGTTAGAAGGAATGCGTGAAGTGCAGGAAAAGGCG
ATTTCCATTTCATCTTCTCCAGGTGGTCCAGAACCGTACCTTTCCACGTTAGAAGTCGAGCACGAAATGGTGAATGGACT
TCTGCAGGCTTCTAAGGAATCATGGGCAGCATTAAAAAAAGCGTTTGAAGCTGTTTCATTTGGACGCTTAAAGCCTTGTA
AAGGTGACCAGTTTGATCCTGAGCTTATTGATACTGTCAAAGGAATGCGTGATCGGGTTAAGAAAACCGTTCAAAGTATG
AAAGAAGATCTGTTTCAACGGGAAGCAGAGGAGTATCTTGAGGATATCAAAAAACTTGCGCCTGTTCTTGAAACGTTAGC
TTCTCTCGTAAATGAATTTAGGGATAAGTATACTGATCTTAAGAAAGAAAAGGGACTTGTTGACTATAGTGACCTTGAGC
ATTACTGTCTTTCAATTTTATTAGATGAGGCATCAACACCTGATAACCCTATCGCTTCAAATGCGGCGAAGGAATATCAG
ACGCAGTTCGCTGAAGTGCTCATTGATGAGTACCAGGATACAAACTCTGTTCAAGAAACGATTCTTAATGCCATTAGCCA
AACGTCCGAAAATGGTGGGAATCGTTTTATGGTAGGTGATGTTAAACAAAGTATATACAGGTTTAGACTCGCTGAGCCCG
GGTTATTTCTAGCAAAATATAAGTCGTTTGGCCGCTCTTCAGAGGAGCCTACTAAACGAATCGATCTTGCACGAAACTTT
CGAAGTCGTGAGGAAGTTTTAAATAGTACCAACTTTATTTTTAAGCAAATTATGGATGAACGCGTTGGGGAAATTAAGTA
CGATCATGCCGCCGAACTTATTCCTGGCGCAGAGTATCCGAAATCTCAAACGGTGGTACCAGAAGTTCATGTGATTGATC
AAAGCTCTGATGTTGAAGAAGATCAAGAGGTTGAAAAAGTTCAGCTTGAAGCACGTTTGATTGCATCGAATATTAAATCC
ATGATGGGAAAGAGCGAAAACGAGCGAACGAAAATATACGATCGTAAAGAAGATCGCATGAGACCTATTCAGTACAGAGA
TATGGTGATCTTAATGCGCGCCACTAGTAGCTGGGCGCCGGTAATGATGGAGGAATTAAAGCAGGCGGGTATTCCGTCTT
ATTCAGACCTTGCGACAGGGTATTTCGAAGCGACAGAAGTAGCGATTATGATGAGTCTTCTAAACGTGATCGATAATCCC
TATCAGGATATTCCGCTCGCATCTGTCTTGCGATCACCGATTATTGGGTTATCGGAAGAAGAACTTGCGTTGATTCGGAT
AAATGAGAAGCAATCAAGTTATTATCTCGCTATGCAGGCGTATTGTGAGACAGAGTCGAATGAGCTTTCAGAGAAAATAG
CACAATTTATCGATGATTTAAATCGCTGGCGAGAACAGGCAAGGCAGTCATCGTTAAGTGAATTAATTTGGCAATTGTAT
CGTGAAACGAATTACTATGAATTTGTCGGCGGAATGCCCGCTGGTTTGCAGCGCCAGGCGAATCTGCGTGCTTTGTATGA
TCGTGCAAGGCAATACGAAGCAACCTCATTTCGTGGATTGTTCCGCTTTCTGCGGTTTATCGATCGAATGAAAGAGCGAG
GAAGCGACCTTGGAACAGCACGTGCACTTGGAGAGCAGGAGGATGTTGTGCGCGTGATGACGATTCATAAAAGCAAGGGA
CTTGAATTTCCTGTCGTCTTTGTCGCAGGCATAGCAAAGCAATTCAACATGAGAGACATGGCAAACCAAATGCTTCTTCA
TAAAGAATTCGGTTTAGCAACGAAATACATTGATCCAATCAATCGTATTAGTTATCCGACGTTACCTTACTTTACATTAC
AAAAGCGAATGAAACTAGAGCTGTTGGCTGAAGAAATGCGCGTCCTTTACGTTGCTTTAACGAGAGCAAAAGAAAAATTA
ATTCTAGTTGGTACGGTGAATGACTGGGAGAAAGAATTACTCTCCTGGGCAGAGGCACCAGGAGAGGAGTGGCTCCTTTC
TGATTATGAGCGCTCAACAAGTAAAACGTATTTGAACTGGATTGGGCCAGCTATTATCAGGCATCAAGACCTATCTTCAA
TAACAGAGGGGGTAGCTAGTTTTCCGAAACATGATGAGGTTTTTCATCACCCATCACGTTGGTCGTTAACGCTCCATCAA
GCTTCGGATTTTTCTCAAATTGAAGCAGAAGACGTTAAGAAACATGAAGAATACGAGGAACTTCTGCGTAGGAAAGCTTA
TGTTCCAGAAGAAAGTGCCTTTAAAGACGTTGTTTATAATCGTCTTAATTGGACATATCCACACCAGGCAGCTGCTGAAA
CAAGATCAAAGCAGTCGGTAACGGAAGTGAAGCGTCAGCGGGAAATTTTCCAGGACGAACGTAGTGACGATCGCCTTGTA
AAAGGCTTTAGCCAATCGTTAAAAGAACGCCCGCGCTTTCTTCAAAGTAAAAAGCTTACGCCTGCTGAGCGCGGAACGGC
GATGCATATCGTTATGCAGCATATTGATTTGCACCAACGGCATGAAGAAAAGGATATTAAAGAATTAATCGCAAAGCTTG
AAACGAAAGAATTATTAACGAACGATCAGGCTCAAGCCATTGATGTGAAACAAATTAAGCACTTGATTGATTCTGATCTA
GGTGACAAGATGAGAAACGCTTCCGAAATATATAAAGAGGTTCCTTTTAGTCTTGGGGTGGATTCGAAATGGATTTATCC
AGAATTCAAAGGAGAACAAGAAACGGTCGTGTTACAGGGAGTTATTGATTGTATCCTGCGCGATCAACACGGAGAATTGC
TGTTAGTCGATTATAAAACAGATGTGATTAAAAATCGTTTTTCTTCAGAGCAACAGGCAATGGAGACAATGAAACGACGT
TATACAACACAGCTTCAACTATATGAAAAAGCGATTAATGAGATTTGGGGTTTGCCATGTAAAGAAAAGATTCTTTTCTT
TTTTGATGGTGGCAAATCACTCTTAATCGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addA Bacillus subtilis subsp. subtilis str. 168

50.241

100

0.505


Multiple sequence alignment