Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   GZ067_RS01370 Genome accession   NZ_CP048431
Coordinates   245027..246016 (+) Length   329 a.a.
NCBI ID   WP_164025782.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA1428     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 240027..251016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GZ067_RS01345 (GZ067_01345) - 241102..241593 (+) 492 WP_000383814.1 DUF948 domain-containing protein -
  GZ067_RS01350 (GZ067_01350) - 241667..242701 (+) 1035 WP_069990144.1 hypothetical protein -
  GZ067_RS01355 (GZ067_01355) - 242857..242940 (+) 84 WP_031797498.1 hypothetical protein -
  GZ067_RS01360 (GZ067_01360) - 243396..244487 (+) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  GZ067_RS01365 (GZ067_01365) - 244841..244954 (+) 114 WP_001788994.1 hypothetical protein -
  GZ067_RS01370 (GZ067_01370) ccpA 245027..246016 (+) 990 WP_164025782.1 catabolite control protein A Regulator
  GZ067_RS01375 (GZ067_01375) - 246114..247283 (-) 1170 WP_001184008.1 acetoin utilization protein AcuC -
  GZ067_RS01380 (GZ067_01380) - 247308..247940 (-) 633 WP_001016008.1 GNAT family N-acetyltransferase -
  GZ067_RS01385 (GZ067_01385) acsA 248109..249814 (+) 1706 Protein_244 acetate--CoA ligase -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36088.25 Da        Isoelectric Point: 5.5054

>NTDB_id=368654 GZ067_RS01370 WP_164025782.1 245027..246016(+) (ccpA) [Staphylococcus aureus strain SA1428]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMRGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=368654 GZ067_RS01370 WP_164025782.1 245027..246016(+) (ccpA) [Staphylococcus aureus strain SA1428]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGTCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAGAGGTAATCTTCCAGATGCTATA
TTATGTATCAGTGACGAAGAAGCTATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGTTTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-49)

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

48.036

100

0.483
  ccpA Streptococcus gordonii str. Challis substr. CH1

47.112

100

0.471
  ccpA Streptococcus pneumoniae D39

46.201

100

0.462

Multiple sequence alignment