Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E8E07_RS03345 Genome accession   NZ_CP040911
Coordinates   678715..679098 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AB17H194     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 673715..684098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8E07_RS03335 nolF 676615..677724 (-) 1110 WP_086611500.1 efflux RND transporter periplasmic adaptor subunit -
  E8E07_RS03340 - 677793..678431 (-) 639 WP_044100316.1 hypothetical protein -
  E8E07_RS03345 pilG 678715..679098 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  E8E07_RS03350 pilH 679121..679483 (+) 363 WP_002116220.1 response regulator -
  E8E07_RS03355 pilI 679544..680080 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  E8E07_RS03360 pilJ 680123..682201 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=368247 E8E07_RS03345 WP_000389061.1 678715..679098(+) (pilG) [Acinetobacter pittii strain AB17H194]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=368247 E8E07_RS03345 WP_000389061.1 678715..679098(+) (pilG) [Acinetobacter pittii strain AB17H194]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment