Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FHK65_RS00040 | Genome accession | NZ_CP040904 |
| Coordinates | 9264..9776 (+) | Length | 170 a.a. |
| NCBI ID | WP_002299768.1 | Uniprot ID | A0A132P5P8 |
| Organism | Enterococcus faecium strain N56454 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4264..14776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FHK65_RS00030 (FHK65_00030) | gyrA | 6208..8679 (+) | 2472 | WP_002288365.1 | DNA gyrase subunit A | - |
| FHK65_RS00035 (FHK65_00035) | rpsF | 8915..9214 (+) | 300 | WP_002288366.1 | 30S ribosomal protein S6 | - |
| FHK65_RS00040 (FHK65_00040) | ssb | 9264..9776 (+) | 513 | WP_002299768.1 | single-stranded DNA-binding protein | Machinery gene |
| FHK65_RS00045 (FHK65_00045) | rpsR | 9802..10038 (+) | 237 | WP_002288370.1 | 30S ribosomal protein S18 | - |
| FHK65_RS00050 (FHK65_00050) | - | 10181..12153 (+) | 1973 | Protein_9 | DHH family phosphoesterase | - |
| FHK65_RS00055 (FHK65_00055) | rplI | 12159..12611 (+) | 453 | WP_002288372.1 | 50S ribosomal protein L9 | - |
| FHK65_RS00060 (FHK65_00060) | dnaB | 12885..14252 (+) | 1368 | WP_002288373.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18437.96 Da Isoelectric Point: 4.6742
>NTDB_id=368147 FHK65_RS00040 WP_002299768.1 9264..9776(+) (ssb) [Enterococcus faecium strain N56454]
MINNVVLVGRLTKDPDLRYTASGTAVATFTLAVNRNFTNQSGNREADFINCVIWRKSAETLANYARKGTLVGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRSASENRQQSGGFQSSGQSAGGFGGNNNSNQTSQSSNGMPDFDRDTSDPFGSSST
IDISDDDLPF
MINNVVLVGRLTKDPDLRYTASGTAVATFTLAVNRNFTNQSGNREADFINCVIWRKSAETLANYARKGTLVGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRSASENRQQSGGFQSSGQSAGGFGGNNNSNQTSQSSNGMPDFDRDTSDPFGSSST
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=368147 FHK65_RS00040 WP_002299768.1 9264..9776(+) (ssb) [Enterococcus faecium strain N56454]
TTGATTAATAATGTTGTATTAGTTGGACGTCTGACGAAAGATCCAGATTTGCGTTACACAGCAAGTGGTACGGCAGTCGC
AACATTTACTTTGGCTGTGAATCGTAATTTTACAAACCAAAGCGGCAATCGCGAGGCTGATTTTATCAACTGTGTGATTT
GGCGCAAATCAGCAGAAACTTTAGCAAACTATGCTCGTAAAGGAACACTTGTAGGTGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTGACAGAAGTAGTAGCTGACAACTTCCAATTGCTGGAAAGTCGTTC
TGCATCTGAAAATCGCCAACAAAGCGGCGGATTCCAAAGTTCTGGTCAATCAGCTGGCGGATTTGGCGGAAACAATAACT
CTAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTCGACCGTGATACTTCTGACCCATTCGGCTCAAGTTCAACG
ATCGACATTTCAGACGATGATTTACCATTCTAA
TTGATTAATAATGTTGTATTAGTTGGACGTCTGACGAAAGATCCAGATTTGCGTTACACAGCAAGTGGTACGGCAGTCGC
AACATTTACTTTGGCTGTGAATCGTAATTTTACAAACCAAAGCGGCAATCGCGAGGCTGATTTTATCAACTGTGTGATTT
GGCGCAAATCAGCAGAAACTTTAGCAAACTATGCTCGTAAAGGAACACTTGTAGGTGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTGACAGAAGTAGTAGCTGACAACTTCCAATTGCTGGAAAGTCGTTC
TGCATCTGAAAATCGCCAACAAAGCGGCGGATTCCAAAGTTCTGGTCAATCAGCTGGCGGATTTGGCGGAAACAATAACT
CTAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTCGACCGTGATACTTCTGACCCATTCGGCTCAAGTTCAACG
ATCGACATTTCAGACGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.887 |
100 |
0.624 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.983 |
100 |
0.6 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
63.208 |
62.353 |
0.394 |