Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FHI56_RS10070 Genome accession   NZ_CP040804
Coordinates   1948415..1948858 (-) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius strain LAB813     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1943415..1953858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHI56_RS10055 (FHI56_10055) - 1944098..1944721 (-) 624 WP_045769268.1 GNAT family N-acetyltransferase -
  FHI56_RS10060 (FHI56_10060) rcrQ 1944829..1946607 (-) 1779 WP_045769269.1 ABC transporter ATP-binding protein Regulator
  FHI56_RS10065 (FHI56_10065) rcrP 1946597..1948411 (-) 1815 WP_045769270.1 ABC transporter ATP-binding protein Regulator
  FHI56_RS10070 (FHI56_10070) rcrR 1948415..1948858 (-) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FHI56_RS10075 (FHI56_10075) - 1949044..1949454 (-) 411 WP_014633541.1 peptide deformylase -
  FHI56_RS10080 (FHI56_10080) - 1949612..1950946 (-) 1335 WP_235289496.1 YfhO family protein -
  FHI56_RS10085 (FHI56_10085) gdhA 1951434..1952786 (-) 1353 WP_045772168.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=367375 FHI56_RS10070 WP_002885568.1 1948415..1948858(-) (rcrR) [Streptococcus salivarius strain LAB813]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=367375 FHI56_RS10070 WP_002885568.1 1948415..1948858(-) (rcrR) [Streptococcus salivarius strain LAB813]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCACAAGGATTTGCCGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment