Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   KPZ59_RS17235 Genome accession   NZ_CP048131
Coordinates   3612375..3614420 (+) Length   681 a.a.
NCBI ID   WP_000204958.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain D46     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3607375..3619420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPZ59_RS17220 (KPZ59_03456) plsB 3607859..3610429 (+) 2571 WP_000045410.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -
  KPZ59_RS17225 (KPZ59_03457) adeT2 3610473..3611459 (-) 987 WP_000712907.1 putative multidrug efflux protein AdeT2 -
  KPZ59_RS17230 (KPZ59_03458) - 3611539..3612354 (-) 816 WP_000547780.1 NAD-dependent epimerase/dehydratase family protein -
  KPZ59_RS17235 (KPZ59_03459) recG 3612375..3614420 (+) 2046 WP_000204958.1 ATP-dependent DNA helicase RecG Machinery gene
  KPZ59_RS17240 (KPZ59_03460) comF 3614413..3615048 (+) 636 WP_000472261.1 ComF family protein Machinery gene
  KPZ59_RS17245 (KPZ59_03461) - 3615051..3615452 (-) 402 WP_000849701.1 NUDIX hydrolase -
  KPZ59_RS17250 (KPZ59_03462) - 3615467..3616048 (-) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  KPZ59_RS17255 (KPZ59_03463) - 3616206..3617219 (+) 1014 WP_000888321.1 CorA family divalent cation transporter -
  KPZ59_RS17260 (KPZ59_03464) - 3617289..3617576 (-) 288 WP_000250997.1 STAS domain-containing protein -
  KPZ59_RS17265 (KPZ59_03465) - 3617588..3618229 (-) 642 WP_001093907.1 MlaC/ttg2D family ABC transporter substrate-binding protein -
  KPZ59_RS17270 (KPZ59_03466) - 3618256..3618936 (-) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -

Sequence


Protein


Download         Length: 681 a.a.        Molecular weight: 76421.03 Da        Isoelectric Point: 7.9534

>NTDB_id=367356 KPZ59_RS17235 WP_000204958.1 3612375..3614420(+) (recG) [Acinetobacter baumannii strain D46]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILSDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGIKVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPDLNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=367356 KPZ59_RS17235 WP_000204958.1 3612375..3614420(+) (recG) [Acinetobacter baumannii strain D46]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTAGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGTGTAGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACCC
CCCTTCCAAAAACGCAGCTCACAGCAATTTATCCAAGTACCGATGGACTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAACATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCATGAGCCACCAGTTGATGCCAATATGATCCAATTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGACAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTACTTGCAAAAAAACTGCTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAGCGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTTGCGTTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTAAGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTAATTGTGGGTACTCATGCCTTATTTCAAG
ATAACGTTGAATTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAGCGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCGATTATTGATGAATTACCCCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCTC
TAGATCGTCGTGAAGAAGTACTGCATCGAATTGCTTCCAACTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCTGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGATCTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAGC
TGCTAATTGCCACAACTGTTATTGAGGTTGGTGTAGATGTACCCAATGCTTCGATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATACGCATATGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.776

98.238

0.489

  recG/mmsA Streptococcus pneumoniae R6

41.654

97.651

0.407

  recG/mmsA Streptococcus pneumoniae R36A

41.654

97.651

0.407

  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389


Multiple sequence alignment