Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FDP16_RS03980 Genome accession   NZ_CP040798
Coordinates   768699..769499 (+) Length   266 a.a.
NCBI ID   WP_176798656.1    Uniprot ID   A0A7H8V023
Organism   Streptococcus sanguinis strain CGMH058     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 763699..774499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDP16_RS03955 (FDP16_04105) - 764025..764705 (-) 681 WP_009659278.1 amino acid ABC transporter permease -
  FDP16_RS03960 (FDP16_04110) - 764718..765530 (-) 813 WP_176798653.1 transporter substrate-binding domain-containing protein -
  FDP16_RS03965 (FDP16_04115) - 765545..766306 (-) 762 WP_176798654.1 amino acid ABC transporter ATP-binding protein -
  FDP16_RS03970 (FDP16_04120) micA 766646..767347 (+) 702 WP_176798655.1 response regulator YycF Regulator
  FDP16_RS03975 (FDP16_04125) micB 767340..768689 (+) 1350 WP_125331413.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FDP16_RS03980 (FDP16_04130) vicX 768699..769499 (+) 801 WP_176798656.1 MBL fold metallo-hydrolase Regulator
  FDP16_RS03985 (FDP16_04135) - 769591..769950 (+) 360 WP_176798657.1 YbaN family protein -
  FDP16_RS03990 (FDP16_04140) rnc 770072..770770 (+) 699 WP_002903151.1 ribonuclease III -
  FDP16_RS03995 (FDP16_04145) smc 770761..774297 (+) 3537 WP_176798658.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29697.58 Da        Isoelectric Point: 5.9432

>NTDB_id=367217 FDP16_RS03980 WP_176798656.1 768699..769499(+) (vicX) [Streptococcus sanguinis strain CGMH058]
MTKGFQYSILASGSSGNCFYLETDQKRILVDAGLSGKKITSLLGEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYNLDI
YANESTWKAMEKDLGKLDANQKHIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIE
NADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLA
QADMAVGHDFQVYDTSPDTATPLTSI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=367217 FDP16_RS03980 WP_176798656.1 768699..769499(+) (vicX) [Streptococcus sanguinis strain CGMH058]
ATGACTAAAGGATTTCAATACAGTATTCTAGCGTCAGGATCAAGCGGTAACTGTTTCTATCTGGAAACAGATCAAAAGCG
GATTCTGGTTGACGCTGGCTTATCAGGCAAGAAAATTACGAGCTTGCTGGGCGAAATTGGCCGCAAGCCTGAGGATTTGG
ATGCCATTTTAGTGACTCATGAGCACAAGGACCACATTCATGGTGTTGGAGTATTAGCTCGCAAGTATAATTTAGATATT
TATGCTAATGAGTCCACTTGGAAGGCTATGGAAAAGGACTTGGGCAAGCTGGATGCTAATCAAAAGCATATCTTTGAACT
GGGCAAAACCAAGACTTTTGGAGACTTGGATGTGGAGAGCTTTGGTGTCAGTCATGATGCAGCCTGTCCGCAGTTTTACC
GCTTTATGAAGGATGATAAGAGCTTTGTCATGCTGACGGATACGGGCTATGTCAGTGACCGGATGGCTGGGATTATCGAA
AATGCCGATGGGTATCTGATTGAGAGCAACCATGATATCGAAATTCTTCGCAGCGGTGCCTATCCTTGGAGCCTCAAGCA
GCGGATTTTGTCGGATATGGGCCACCTGTCCAATGAAGATGGAGCAGAGACCATGATTCGGACTTTGGGCAATCGCACCA
AGCGAATCTATCTGGGACATCTCAGTAAGGAAAACAATATCAAGGAATTGGCTCATATGACCATGGTCAATCAACTGGCT
CAAGCCGATATGGCAGTCGGTCACGACTTCCAGGTCTATGATACCTCGCCTGATACGGCGACGCCTTTGACGAGTATTTA
A

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(27-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8V023

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.608

98.872

0.797

Multiple sequence alignment