Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FDP16_RS03905 Genome accession   NZ_CP040798
Coordinates   754784..755788 (+) Length   334 a.a.
NCBI ID   WP_002894913.1    Uniprot ID   A0A0B7GRU9
Organism   Streptococcus sanguinis strain CGMH058     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 749784..760788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FDP16_RS03885 (FDP16_04035) - 750206..751234 (-) 1029 WP_176798643.1 ABC transporter substrate-binding protein -
  FDP16_RS03890 (FDP16_04040) - 751290..752045 (-) 756 WP_176798644.1 ABC transporter ATP-binding protein -
  FDP16_RS03895 (FDP16_04045) - 752047..753093 (-) 1047 WP_176798645.1 iron ABC transporter permease -
  FDP16_RS03900 (FDP16_04050) - 753539..754621 (-) 1083 WP_176798646.1 Xaa-Pro peptidase family protein -
  FDP16_RS03905 (FDP16_04055) ccpA 754784..755788 (+) 1005 WP_002894913.1 catabolite control protein A Regulator
  FDP16_RS03910 (FDP16_04060) - 756034..757032 (+) 999 WP_176798647.1 glycosyltransferase family 4 protein -
  FDP16_RS03915 (FDP16_04065) - 757034..758356 (+) 1323 WP_176798648.1 glycosyltransferase family 4 protein -
  FDP16_RS03920 (FDP16_04070) - 758427..758909 (+) 483 Protein_749 hypothetical protein -
  FDP16_RS03925 (FDP16_04075) - 759171..759812 (+) 642 WP_176798649.1 AAA family ATPase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37010.05 Da        Isoelectric Point: 6.3717

>NTDB_id=367214 FDP16_RS03905 WP_002894913.1 754784..755788(+) (ccpA) [Streptococcus sanguinis strain CGMH058]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVELLAKRNKKIAFVSGPLVDDINGKIRLSGYKDGLKNKKLSYSEGLVFESKYSYDDGYHLAERVIASK
ATAAFVTGDELAAGLLNGLSDQGIKVPEDFEIITSDDSQVARFTRPNLSTIGQPLYDIGAISMRMLTKIMHKEELEEREV
LLAHSISERKSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=367214 FDP16_RS03905 WP_002894913.1 754784..755788(+) (ccpA) [Streptococcus sanguinis strain CGMH058]
ATGAACACAGACGACACAGTAACCATTTATGATGTCGCCCGTGAAGCGGGAGTTTCGATGGCGACAGTCAGTCGGGTAGT
GAATGGAAACAAGAACGTCAAAGAAAACACACGTAAAAAAGTTTTAGAGGTCATTGATCGTCTTGACTATCGTCCAAATG
CAGTAGCACGTGGACTAGCCAGCAAGAAGACTACAACCGTCGGCGTTGTCATTCCAAATATTACCAATAGCTATTTCTCA
ACCTTGGCAAAAGGGATTGATGATATTGCTGAAATGTATAAATACAATATTGTCTTGGCTAACAGTGATGAGGATGATGA
CAAGGAAGTCTCCGTTGTCAATACCCTCTTTTCTAAACAGGTGGATGGCATTATTTTCATGGGCTATCATCTGACGGAGA
AAATTCGCTCAGAGTTTTCACGTTCGCGCACGCCGGTCGTTTTGGCGGGGACTGTCGATGTGGAGCATCAGCTTCCGAGC
GTCAATATTGACTACAAGCAAGCAACAGTTGATGCTGTAGAATTACTGGCTAAGCGCAATAAGAAAATTGCCTTTGTCAG
CGGGCCGCTTGTAGATGATATCAACGGGAAAATCCGTCTATCAGGCTATAAAGATGGCTTGAAAAACAAGAAACTTTCAT
ACAGCGAAGGCTTAGTTTTTGAATCTAAATATTCTTATGATGATGGCTACCACTTGGCAGAACGTGTCATTGCTTCCAAA
GCAACTGCAGCTTTTGTCACAGGAGATGAACTGGCAGCAGGCCTCTTAAATGGTCTGTCTGATCAAGGCATCAAGGTTCC
AGAAGATTTTGAAATCATTACCAGTGATGATTCGCAAGTAGCTCGTTTCACTCGTCCTAACCTTTCTACAATCGGCCAGC
CCCTCTATGACATTGGCGCTATCAGTATGCGCATGCTGACTAAGATTATGCATAAGGAAGAATTGGAAGAACGCGAAGTT
CTCCTGGCTCACAGCATTAGCGAGCGTAAATCAACTCGGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7GRU9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.916

100

0.919

  ccpA Streptococcus pneumoniae D39

86.826

100

0.868

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.102

0.551


Multiple sequence alignment