Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FG051_RS00040 | Genome accession | NZ_CP040736 |
| Coordinates | 9235..9810 (+) | Length | 191 a.a. |
| NCBI ID | WP_057813412.1 | Uniprot ID | A0A5B7SZW2 |
| Organism | Companilactobacillus futsaii strain Y97 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4235..14810
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FG051_RS00025 (FG051_00025) | gyrB | 4241..6190 (+) | 1950 | WP_057813418.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| FG051_RS00030 (FG051_00030) | gyrA | 6207..8699 (+) | 2493 | WP_057813416.1 | DNA gyrase subunit A | - |
| FG051_RS00035 (FG051_00035) | rpsF | 8901..9197 (+) | 297 | WP_057813414.1 | 30S ribosomal protein S6 | - |
| FG051_RS00040 (FG051_00040) | ssb | 9235..9810 (+) | 576 | WP_057813412.1 | single-stranded DNA-binding protein | Machinery gene |
| FG051_RS00045 (FG051_00045) | rpsR | 9832..10068 (+) | 237 | WP_010017915.1 | 30S ribosomal protein S18 | - |
| FG051_RS00050 (FG051_00050) | - | 10457..10657 (+) | 201 | WP_057813410.1 | helix-turn-helix transcriptional regulator | - |
| FG051_RS00055 (FG051_00055) | - | 10661..11221 (+) | 561 | WP_149029768.1 | DUF3278 domain-containing protein | - |
| FG051_RS00060 (FG051_00060) | - | 11378..13378 (+) | 2001 | Protein_11 | DHH family phosphoesterase | - |
| FG051_RS00065 (FG051_00065) | rplI | 13392..13847 (+) | 456 | WP_057813404.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21141.48 Da Isoelectric Point: 4.7512
>NTDB_id=366851 FG051_RS00040 WP_057813412.1 9235..9810(+) (ssb) [Companilactobacillus futsaii strain Y97]
MINRVVLVGRLTRDPELRYTANGAAVASFTVAVNRQFTNSQGEREADFINCVIWRKAAENFSNFTNKGSLVGIDGRLQTR
NYENQQGQRVYVTEVVVENFSLLESRAESEKRNAGNNSNQAPSYNNNNQSSQSPFGNNNNNYGNNAGNSNFDNSNNNSNN
NNQSNNSNNNSGDPFANNSKPIDISDDDLPF
MINRVVLVGRLTRDPELRYTANGAAVASFTVAVNRQFTNSQGEREADFINCVIWRKAAENFSNFTNKGSLVGIDGRLQTR
NYENQQGQRVYVTEVVVENFSLLESRAESEKRNAGNNSNQAPSYNNNNQSSQSPFGNNNNNYGNNAGNSNFDNSNNNSNN
NNQSNNSNNNSGDPFANNSKPIDISDDDLPF
Nucleotide
Download Length: 576 bp
>NTDB_id=366851 FG051_RS00040 WP_057813412.1 9235..9810(+) (ssb) [Companilactobacillus futsaii strain Y97]
ATGATTAATCGAGTAGTTTTAGTTGGACGCCTGACACGTGATCCAGAATTAAGATATACTGCTAATGGAGCAGCGGTTGC
CAGTTTTACAGTTGCTGTAAACAGACAATTTACTAATTCTCAAGGTGAACGTGAAGCCGATTTTATCAATTGTGTCATTT
GGAGAAAAGCTGCCGAGAATTTTTCTAATTTCACTAATAAAGGTTCTCTTGTAGGTATTGATGGACGTCTTCAAACACGT
AACTATGAAAACCAACAAGGACAACGAGTATACGTAACAGAAGTAGTTGTAGAAAACTTCTCCTTGTTAGAATCTCGTGC
CGAAAGTGAAAAGAGAAACGCCGGTAACAATTCCAATCAAGCACCTAGCTATAATAACAACAATCAATCAAGTCAGTCTC
CGTTTGGAAATAATAATAACAATTATGGAAATAATGCTGGCAACAGTAATTTCGATAATAGTAACAACAATTCTAATAAC
AATAATCAATCTAACAATTCTAACAATAATAGTGGCGATCCTTTTGCTAACAATAGCAAACCGATTGACATTTCTGATGA
TGATTTACCATTTTAA
ATGATTAATCGAGTAGTTTTAGTTGGACGCCTGACACGTGATCCAGAATTAAGATATACTGCTAATGGAGCAGCGGTTGC
CAGTTTTACAGTTGCTGTAAACAGACAATTTACTAATTCTCAAGGTGAACGTGAAGCCGATTTTATCAATTGTGTCATTT
GGAGAAAAGCTGCCGAGAATTTTTCTAATTTCACTAATAAAGGTTCTCTTGTAGGTATTGATGGACGTCTTCAAACACGT
AACTATGAAAACCAACAAGGACAACGAGTATACGTAACAGAAGTAGTTGTAGAAAACTTCTCCTTGTTAGAATCTCGTGC
CGAAAGTGAAAAGAGAAACGCCGGTAACAATTCCAATCAAGCACCTAGCTATAATAACAACAATCAATCAAGTCAGTCTC
CGTTTGGAAATAATAATAACAATTATGGAAATAATGCTGGCAACAGTAATTTCGATAATAGTAACAACAATTCTAATAAC
AATAATCAATCTAACAATTCTAACAATAATAGTGGCGATCCTTTTGCTAACAATAGCAAACCGATTGACATTTCTGATGA
TGATTTACCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
62.304 |
100 |
0.623 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.292 |
100 |
0.576 |