Detailed information NTG0366715

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FF090_RS14895
• Genome accession: NZ_CP040709
• Coordinates: 3153741..3155186 (-)
• Length: 481 a.a.
• NCBI ID: WP_138857469.1
• Uniprot ID: A0A840S4M7
• Organism: Inhella inkyongensis strain IMCC1713
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3148741..3160186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FF090_RS14885	-	3149836..3152706 (-)	2871	WP_138857467.1	ribonucleoside-diphosphate reductase subunit alpha	-
FF090_RS14890	ampD	3153167..3153763 (-)	597	WP_138857468.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
FF090_RS14895	pilR	3153741..3155186 (-)	1446	WP_138857469.1	sigma-54 dependent transcriptional regulator	Regulator
FF090_RS14900	-	3155183..3156913 (-)	1731	WP_138857470.1	PAS domain-containing sensor histidine kinase	-
FF090_RS14905	-	3156910..3157146 (-)	237	WP_138857471.1	PP0621 family protein	-
FF090_RS14910	-	3157147..3157917 (-)	771	WP_138857472.1	inner membrane protein YpjD	-
FF090_RS14915	ffh	3158005..3159390 (+)	1386	WP_138857473.1	signal recognition particle protein	-
FF090_RS14920	-	3159489..3159953 (+)	465	WP_175423680.1	DUF2726 domain-containing protein	-

Sequence

Protein

• Length: 481 a.a.
• Molecular weight: 51648.98 Da
• Isoelectric Point: 5.4237

>NTDB_id=366715 FF090_RS14895 WP_138857469.1 3153741..3155186(-) (pilR) [Inhella inkyongensis strain IMCC1713]
MSSTDRLLVVDDEPDLRTLYELTLLREGYSLVSAETVAEALALLQAESFAAVITDMRLPDGSGLDLLNWLEQQRRSERAI
VITAHGSAENAVEALKAGAFDYLTKPVDLRQFRSVVATALGRVAGKPAPRRDEAAGKAKGQALARLAGPSAAMEQVRELI
RKVGRSMAPVLLQGESGTGKELVARAIHGEGSRADQPFVAVNCGAIPEQLLEAEFFGYRKGAFTGANEDREGFFQAAQGG
TLFLDEIGDLPLAMQSKLLRAIQERSVRPVGAVAELPVNLRLLSATHKDLAAEVAAGRFRQDLFYRLNVIQIRVPPLRER
IGDVAAISAGLLERIARDAGVHPVPRLGADALARLAAYNFPGNVRELENVLHRALALSGATELCAEDLDLPDSVSTEDSS
FGALPAGTAPAPLALPSEEALPSDLAAHLDEVERKVLLRALAQCRYNRTAAGARLGLSLRQMRYRMARLGIQVDDGEPPL
G

Nucleotide

• Length: 1446 bp

>NTDB_id=366715 FF090_RS14895 WP_138857469.1 3153741..3155186(-) (pilR) [Inhella inkyongensis strain IMCC1713]
ATGAGCTCTACTGATCGCCTGCTGGTTGTTGATGACGAACCCGATCTGCGCACGCTGTACGAGCTGACCCTGTTGCGCGA
GGGCTATAGCCTGGTGAGCGCCGAGACGGTGGCCGAGGCGCTGGCGTTGTTGCAGGCCGAGAGCTTTGCCGCCGTCATCA
CCGACATGCGCCTGCCCGATGGCTCGGGCCTGGATCTGCTGAATTGGCTGGAGCAGCAAAGGCGCAGCGAACGGGCCATC
GTCATCACGGCCCACGGCTCGGCAGAGAACGCAGTGGAGGCCTTGAAGGCGGGCGCCTTTGATTACCTGACCAAGCCGGT
GGACTTGCGCCAGTTCCGCAGCGTGGTGGCCACGGCCTTGGGCCGTGTGGCGGGCAAGCCGGCGCCGCGTCGAGACGAGG
CGGCCGGCAAGGCCAAAGGTCAGGCCCTGGCCCGCTTGGCCGGACCCTCTGCGGCGATGGAGCAGGTGCGCGAACTGATC
CGAAAGGTCGGACGCTCGATGGCGCCGGTGCTGTTGCAGGGCGAGTCGGGCACCGGCAAGGAGTTGGTCGCTCGTGCCAT
CCATGGCGAAGGATCCCGGGCCGACCAGCCCTTTGTGGCGGTGAACTGTGGAGCCATCCCCGAGCAGTTGTTGGAGGCCG
AGTTCTTCGGCTACCGCAAGGGAGCCTTCACGGGCGCCAACGAAGACCGCGAAGGCTTCTTCCAGGCCGCTCAGGGGGGC
ACCCTGTTCCTGGATGAAATCGGCGATTTGCCGCTGGCCATGCAGAGCAAACTGTTGCGGGCCATTCAAGAGCGCTCGGT
GCGGCCGGTGGGCGCGGTGGCGGAGCTGCCGGTGAACTTGCGCCTGTTGTCGGCCACTCACAAGGATTTGGCCGCCGAAG
TGGCGGCGGGTCGCTTTCGACAGGACCTGTTCTACCGCCTGAATGTGATCCAGATCCGCGTGCCGCCGCTGCGCGAGCGC
ATCGGGGATGTGGCCGCCATCAGCGCTGGGCTGCTGGAGCGAATCGCCCGCGATGCTGGTGTGCATCCGGTGCCCCGGCT
TGGCGCGGATGCGCTGGCGCGCCTGGCGGCCTACAACTTTCCGGGCAATGTGCGCGAACTGGAGAACGTGTTGCACCGCG
CCCTGGCGCTGTCCGGCGCCACCGAGCTGTGCGCCGAGGACCTGGATCTGCCCGACAGCGTGTCCACTGAGGACTCCAGC
TTCGGTGCTTTGCCTGCAGGCACCGCGCCGGCGCCGCTGGCCTTGCCGAGCGAGGAAGCCCTGCCCAGTGATCTGGCCGC
CCATCTCGACGAGGTGGAGCGCAAGGTCTTGCTGCGGGCCTTGGCGCAGTGTCGCTACAACCGCACGGCGGCGGGTGCGC
GGCTTGGGTTGTCGCTGCGGCAGATGCGCTATCGCATGGCGCGGCTGGGCATCCAGGTGGACGATGGTGAGCCGCCGCTT
GGCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (429-468)

• Sigma-54 interaction domain (Sigma54_activat) (147-312)

• Response regulator receiver domain (Response_reg) (8-116)

3D structure

• AlphaFold DB: A0A840S4M7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	52.239	97.505	0.509
pilR	Acinetobacter baumannii strain A118	40.89	98.129	0.401