Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG/mmsA   Type   Machinery gene
Locus tag   M594_RS02695 Genome accession   NZ_CP047883
Coordinates   509037..511052 (+) Length   671 a.a.
NCBI ID   WP_173875884.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V3-A4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 504037..516052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS02675 (M594_02700) - 505454..506485 (+) 1032 WP_049500894.1 3-deoxy-7-phosphoheptulonate synthase -
  M594_RS02680 (M594_02705) - 506487..507518 (+) 1032 WP_140833763.1 3-deoxy-7-phosphoheptulonate synthase -
  M594_RS02685 (M594_02710) acpS 507563..507925 (+) 363 WP_125458261.1 holo-ACP synthase -
  M594_RS02690 (M594_02715) alr 507915..509018 (+) 1104 WP_173875883.1 alanine racemase -
  M594_RS02695 (M594_02720) recG/mmsA 509037..511052 (+) 2016 WP_173875884.1 ATP-dependent DNA helicase RecG Machinery gene
  M594_RS02700 (M594_02725) - 511477..512457 (+) 981 WP_173875885.1 acetylxylan esterase -

Sequence


Protein


Download         Length: 671 a.a.        Molecular weight: 75278.86 Da        Isoelectric Point: 5.9460

>NTDB_id=366287 M594_RS02695 WP_173875884.1 509037..511052(+) (recG/mmsA) [Streptococcus mitis strain S022-V3-A4]
MNLHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQVVTPASVQYYGFKRNRLR
FSLKQGEVVFAVNFFNQPYLADKIELGATLAVFGKWDRAKASLTGMKVLAQVEDDLQPVYRLAQGISQASLVKVIKTAFD
QGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLVEYKQALRRIKFEELFYFQMQLQTLKSENRIQGSGLVLNWSQE
KVTAVKESLPFALTQAQEKSLQEILADMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQAALMVPTEILAEQHFES
LQNLFPDLKLALLTGSLKTAEKREVLETIAKGEADLIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRVLREKGDNPD
VLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIKHEQLPQVLTWLEGEIQKGSQAYVISPLIEESEALDLKN
AIALSEELTAHFAGKAEVALLHGKMKSDEKDQIMQNFKERKTDILVSTTVIEVGVNVPNATVMIIMDADRFGLSQLHQLR
GRVGRGDKQSYAVLVANPKTDSGKDRMRIMTETTNGFVLAEEDLKMRGSGEIFGTRQSGLPEFQVADIIEDFPILEEARK
VASYISSIEAWQEDPEWRMIALHMEKKEHLD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=366287 M594_RS02695 WP_173875884.1 509037..511052(+) (recG/mmsA) [Streptococcus mitis strain S022-V3-A4]
ATGAATCTACATCAACCCTTGCATGTCTTACCTGGTGTGGGACCAAAGTCAGCAGAAAAATACGCCAAACTAGGAATTGA
AAATTTGCAAGACCTCTTGCTCTACTTTCCTTTCCGTTATGAAGACTTTAAGACTAAGCAGGTGCTGGAGCTAGAAGACG
GCGAGAAGGCGGTTCTTTCTGGTCAGGTCGTGACTCCTGCTAGTGTTCAGTATTATGGATTTAAGCGCAATCGCCTGCGT
TTTAGCCTCAAGCAGGGAGAAGTCGTTTTTGCGGTGAATTTTTTTAACCAGCCCTATCTAGCAGATAAGATAGAGTTGGG
AGCAACTCTTGCCGTCTTTGGAAAATGGGACCGTGCCAAGGCTAGTCTAACTGGGATGAAGGTCCTGGCTCAGGTGGAAG
ATGACCTCCAACCTGTTTATCGCTTGGCTCAGGGAATCAGTCAAGCCAGTCTGGTCAAGGTCATCAAGACGGCTTTTGAT
CAGGGACTGGACCTCTTGATAGAAGAAAATCTTCCCCAGTCTTTGCTGGACAAATACAAACTCATGTCCCGTTGTCAGGC
TGTTCGTGCCATGCATTTTCCCAAGGATTTGGTAGAATACAAGCAGGCTCTTCGCCGTATCAAATTTGAGGAACTTTTTT
ATTTCCAAATGCAGTTACAGACGCTCAAGTCTGAAAATAGAATTCAGGGAAGCGGTCTGGTTCTGAATTGGTCTCAGGAA
AAAGTGACAGCAGTCAAGGAAAGCCTTCCTTTTGCCTTGACACAAGCTCAGGAAAAGAGTTTGCAGGAAATTTTGGCCGA
CATGAAGTCCGACCACCACATGAATCGTCTCCTACAAGGGGATGTGGGGAGCGGAAAAACAGTAGTTGCTGGCTTGGCCA
TGTTTGCAGCAGTGACAGCTGGGTACCAGGCTGCTCTCATGGTGCCAACAGAGATTTTAGCAGAGCAGCATTTTGAGAGT
TTACAGAACCTCTTTCCCGACTTGAAACTGGCTCTCTTGACAGGTTCCTTGAAAACTGCAGAAAAGAGAGAAGTCTTGGA
GACTATTGCCAAGGGTGAGGCTGATTTGATTATCGGAACCCATGCTCTGATTCAGGATGGAGTGGATTATGCTCGTCTGG
GCTTGATTATCATCGATGAGCAGCACCGCTTTGGTGTGGGGCAAAGGCGTGTTCTGAGAGAAAAAGGGGATAATCCAGAT
GTTCTCATGATGACAGCGACTCCTATTCCACGGACGCTGGCCATCACAGCCTTTGGCGATATGGATGTTTCCATTATCGA
CCAGATGCCAGCAGGGCGGAAGCCTATTGTGACACGCTGGATCAAACATGAGCAATTACCTCAGGTCTTGACTTGGTTAG
AGGGGGAAATCCAAAAAGGTTCTCAAGCCTATGTCATCTCTCCCTTGATTGAAGAATCAGAAGCTCTGGATTTGAAAAAT
GCCATTGCCTTATCAGAGGAGTTGACGGCTCATTTTGCAGGAAAGGCAGAAGTTGCTCTTCTACATGGTAAGATGAAGAG
TGATGAAAAAGACCAGATTATGCAGAATTTCAAAGAGAGAAAAACGGATATTCTGGTTTCGACAACGGTTATCGAGGTTG
GGGTTAATGTTCCCAATGCGACAGTTATGATTATCATGGATGCCGATCGGTTCGGTCTCAGCCAGCTTCACCAGCTCAGA
GGTCGTGTCGGTCGGGGGGACAAGCAGTCCTATGCTGTTCTCGTTGCCAATCCCAAGACGGATTCTGGGAAAGACCGCAT
GCGCATCATGACAGAAACCACCAATGGATTTGTCCTGGCCGAAGAAGATTTGAAAATGCGTGGTTCAGGTGAAATTTTTG
GAACCAGACAGTCAGGTCTTCCAGAGTTCCAAGTGGCTGATATTATCGAGGATTTTCCGATTTTAGAAGAAGCCAGAAAG
GTTGCTAGCTACATTAGTTCGATAGAAGCTTGGCAAGAGGATCCAGAATGGCGCATGATTGCCCTTCATATGGAAAAGAA
AGAACATTTAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

98.063

100

0.981

  recG/mmsA Streptococcus pneumoniae R36A

98.063

100

0.981

  recG Bacillus subtilis subsp. subtilis str. 168

49.775

99.404

0.495

  recG Neisseria meningitidis strain C311

39.357

97.317

0.383