Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SMUNN2025_RS02820 Genome accession   NC_013928
Coordinates   542034..543035 (+) Length   333 a.a.
NCBI ID   WP_002264971.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 537034..548035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS02795 (SmuNN2025_0516) - 537040..537558 (+) 519 WP_002278113.1 hypothetical protein -
  SMUNN2025_RS02800 (SmuNN2025_0517) celB 537574..538932 (+) 1359 WP_002262793.1 PTS cellobiose transporter subunit IIC -
  SMUNN2025_RS02805 (SmuNN2025_0518) - 539198..539968 (+) 771 WP_002278112.1 carbonic anhydrase -
  SMUNN2025_RS02810 (SmuNN2025_0519) - 540095..540676 (+) 582 WP_002271286.1 CDP-archaeol synthase -
  SMUNN2025_RS02815 (SmuNN2025_0520) - 540792..541871 (-) 1080 WP_002268574.1 M24 family metallopeptidase -
  SMUNN2025_RS02820 (SmuNN2025_0521) ccpA 542034..543035 (+) 1002 WP_002264971.1 catabolite control protein A Regulator
  SMUNN2025_RS02825 (SmuNN2025_0522) - 543183..544643 (+) 1461 WP_012997625.1 alpha-amylase -
  SMUNN2025_RS02830 (SmuNN2025_0523) - 544753..545751 (+) 999 WP_002278110.1 glycosyltransferase -
  SMUNN2025_RS02835 (SmuNN2025_0524) - 545753..547087 (+) 1335 WP_002271828.1 glycosyltransferase family 4 protein -
  SMUNN2025_RS09985 - 547166..547364 (+) 199 Protein_522 hypothetical protein -
  SMUNN2025_RS02840 (SmuNN2025_0525) - 547358..547999 (+) 642 WP_002278108.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36647.91 Da        Isoelectric Point: 6.8583

>NTDB_id=36582 SMUNN2025_RS02820 WP_002264971.1 542034..543035(+) (ccpA) [Streptococcus mutans NN2025]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPFIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=36582 SMUNN2025_RS02820 WP_002264971.1 542034..543035(+) (ccpA) [Streptococcus mutans NN2025]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCTTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

75.676

100

0.757

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553


Multiple sequence alignment