Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LROSL1_RS07315 Genome accession   NZ_CP040586
Coordinates   1538849..1540114 (-) Length   421 a.a.
NCBI ID   WP_178914207.1    Uniprot ID   -
Organism   Furfurilactobacillus rossiae strain L1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1533849..1545114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LROSL1_RS07310 (LROSL1_1396) - 1537089..1538798 (-) 1710 WP_017261984.1 proline--tRNA ligase -
  LROSL1_RS07315 (LROSL1_1397) eeP 1538849..1540114 (-) 1266 WP_178914207.1 RIP metalloprotease RseP Regulator
  LROSL1_RS07320 (LROSL1_1398) - 1540209..1540994 (-) 786 WP_178914208.1 phosphatidate cytidylyltransferase -
  LROSL1_RS07325 (LROSL1_1399) - 1541040..1541735 (-) 696 WP_236402217.1 isoprenyl transferase -
  LROSL1_RS07330 (LROSL1_1400) frr 1542156..1542719 (-) 564 WP_017261988.1 ribosome recycling factor -
  LROSL1_RS07335 (LROSL1_1401) pyrH 1542721..1543443 (-) 723 WP_017261989.1 UMP kinase -
  LROSL1_RS07340 (LROSL1_1402) tsf 1543526..1544401 (-) 876 WP_017261990.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 421 a.a.        Molecular weight: 45659.95 Da        Isoelectric Point: 9.7228

>NTDB_id=365448 LROSL1_RS07315 WP_178914207.1 1538849..1540114(-) (eeP) [Furfurilactobacillus rossiae strain L1]
MVKTIVAFIIVFGILVVVHEFGHFYFAKRSGILVREFSIGMGPKVFWTHKNGTLYTIRILPLGGYVRMAGAAEDEDDQLQ
PGTPISVMVGDSGKVTRINASDQTTLFNGIPVIVTESDLVDQLVIKGYENGDESVVKTYAVDHDATIIEKDGTEVLIAPR
DVQFQSATLWHRILTNFAGPLNNFILAWLVFAIMGFAMGGVASNSNAISGVLTNTPAKSAGLKSGDRIVSVNDKRTNSWT
AVTSAITSDTHGDITLGIKRGQKTVKHVKITPQVKTVSGSKTRTVGIKRGIDTGFFAKLFGGFWNTTVLLFAALGHLFTH
FSLNDLGGPVAIYANTATATQAGWSGILYWLGFLSLNLGIVNLLPIPALDGGKLVLNVIEAIRRKPLSQQTEGVVTIIGF
GFVLFLMILVTWNDIMRYFVH

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=365448 LROSL1_RS07315 WP_178914207.1 1538849..1540114(-) (eeP) [Furfurilactobacillus rossiae strain L1]
ATGGTAAAAACAATTGTTGCTTTTATTATTGTTTTTGGAATTTTAGTGGTCGTGCATGAGTTTGGCCACTTTTATTTTGC
CAAACGGTCAGGTATTCTTGTGCGTGAATTTTCAATCGGAATGGGTCCCAAAGTTTTTTGGACGCACAAAAACGGGACGT
TGTATACGATTCGAATTTTGCCCTTAGGGGGTTATGTTCGAATGGCCGGTGCTGCCGAGGATGAGGATGACCAACTTCAA
CCGGGAACGCCAATCAGTGTTATGGTGGGCGATTCTGGTAAAGTCACCAGAATTAATGCTAGTGATCAAACGACGCTGTT
TAATGGCATTCCTGTTATTGTGACGGAGTCTGACTTAGTAGATCAATTGGTCATAAAGGGTTACGAAAACGGTGACGAAA
GTGTCGTCAAGACGTATGCAGTAGATCACGATGCAACAATCATTGAAAAGGACGGCACAGAGGTGTTGATTGCGCCACGT
GATGTCCAGTTTCAGTCGGCTACGTTGTGGCACCGTATTTTAACTAACTTTGCAGGACCACTGAATAACTTTATTCTGGC
GTGGTTGGTGTTTGCCATTATGGGATTCGCCATGGGTGGCGTTGCCAGTAATAGCAACGCGATTTCAGGAGTATTAACGA
ATACGCCGGCGAAATCGGCTGGCCTGAAATCGGGTGACCGAATCGTTAGCGTTAATGACAAACGCACTAACAGCTGGACG
GCTGTGACAAGTGCTATTACTAGTGATACCCATGGCGACATTACACTTGGCATTAAGCGTGGTCAAAAGACGGTTAAACA
TGTCAAAATAACGCCGCAGGTAAAAACTGTTTCTGGCAGTAAAACGCGGACCGTTGGCATTAAACGTGGTATCGATACCG
GCTTTTTTGCAAAGCTATTTGGTGGGTTCTGGAACACGACTGTGCTGTTGTTCGCGGCGCTCGGTCATTTGTTCACGCAT
TTCAGTCTTAATGACCTTGGTGGGCCTGTGGCGATTTATGCGAATACGGCCACAGCTACACAGGCTGGTTGGAGTGGTAT
CCTCTACTGGCTAGGTTTTTTATCATTAAATTTAGGAATCGTCAACTTGTTGCCAATTCCTGCGCTTGACGGTGGTAAAC
TAGTTTTAAACGTAATTGAAGCAATTCGACGTAAACCATTGTCACAGCAAACTGAAGGTGTCGTTACAATCATCGGATTT
GGTTTTGTTTTGTTTCTGATGATTCTGGTCACGTGGAACGATATCATGCGCTATTTTGTTCACTGA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(208-265)

Peptidase family M50 (Peptidase_M50)

(7-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.649

100

0.504
  eeP Streptococcus thermophilus LMG 18311

49.649

100

0.504

Multiple sequence alignment