Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | FC605_RS12445 | Genome accession | NZ_CP040528 |
| Coordinates | 2429233..2429568 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain PR10 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2424233..2434568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FC605_RS12425 (FC605_12425) | gcvT | 2424826..2425914 (-) | 1089 | WP_080529534.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| FC605_RS12430 (FC605_12430) | hepAA | 2426355..2428028 (+) | 1674 | WP_080529535.1 | SNF2-related protein | - |
| FC605_RS12435 (FC605_12435) | yqhG | 2428049..2428843 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| FC605_RS12440 (FC605_12440) | sinI | 2429026..2429199 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| FC605_RS12445 (FC605_12445) | sinR | 2429233..2429568 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| FC605_RS12450 (FC605_12450) | tasA | 2429661..2430446 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| FC605_RS12455 (FC605_12455) | sipW | 2430510..2431082 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| FC605_RS12460 (FC605_12460) | tapA | 2431066..2431827 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| FC605_RS12465 (FC605_12465) | yqzG | 2432099..2432425 (+) | 327 | WP_029317915.1 | YqzG/YhdC family protein | - |
| FC605_RS12470 (FC605_12470) | spoIITA | 2432467..2432646 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| FC605_RS12475 (FC605_12475) | comGG | 2432717..2433091 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| FC605_RS12480 (FC605_12480) | comGF | 2433092..2433475 (-) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| FC605_RS12485 (FC605_12485) | comGE | 2433501..2433848 (-) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| FC605_RS12490 (FC605_12490) | comGD | 2433832..2434263 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| FC605_RS12495 (FC605_12495) | comGC | 2434253..2434549 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=365018 FC605_RS12445 WP_003226345.1 2429233..2429568(+) (sinR) [Bacillus subtilis strain PR10]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=365018 FC605_RS12445 WP_003226345.1 2429233..2429568(+) (sinR) [Bacillus subtilis strain PR10]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |