Detailed information NTG0364441

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FEO88_RS18180
• Genome accession: NZ_CP040439
• Coordinates: 3905543..3906916 (+)
• Length: 457 a.a.
• NCBI ID: WP_154353250.1
• Uniprot ID: -
• Organism: Stenotrophomonas maltophilia strain PEG-141
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3900543..3911916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FEO88_RS18165 (FEO88_18325)	sucD	3901398..3902273 (-)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-
FEO88_RS18170 (FEO88_18330)	sucC	3902294..3903463 (-)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
FEO88_RS18175 (FEO88_18335)	-	3903869..3905482 (+)	1614	WP_154353249.1	ATP-binding protein	-
FEO88_RS18180 (FEO88_18340)	pilR	3905543..3906916 (+)	1374	WP_154353250.1	sigma-54 dependent transcriptional regulator	Regulator
FEO88_RS18185 (FEO88_18345)	pilB	3907439..3909172 (-)	1734	WP_154353251.1	type IV-A pilus assembly ATPase PilB	Machinery gene
FEO88_RS18190 (FEO88_18350)	-	3909393..3909800 (-)	408	WP_154353650.1	pilin	-
FEO88_RS18195 (FEO88_18355)	-	3909951..3910376 (-)	426	WP_154353252.1	pilin	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49530.84 Da
• Isoelectric Point: 6.5140

>NTDB_id=364441 FEO88_RS18180 WP_154353250.1 3905543..3906916(+) (pilR) [Stenotrophomonas maltophilia strain PEG-141]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNTERPAPGPATEQAARLLGASPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFIPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYTFPGNVRELENILERALALAEEDRIGADDLRLPQHAPRAPGGAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=364441 FEO88_RS18180 WP_154353250.1 3905543..3906916(+) (pilR) [Stenotrophomonas maltophilia strain PEG-141]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGATGAACGCGATATCCGCGAACTGCTGGTACTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCCGCCAACCTGGCCGAAGCGCGCGAGCTGCTGGCCAGCAACCCGTACGACCTGTGCATCA
CCGACATGCGCCTTCCGGATGGCAACGGCATCGAACTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCGTTCGGCAGCATGGACCTGGCCGTGGAAGCGCTGAAAGCCGGCGCCTTCGACTTCGTCAGCAAACCGGT
GGACATCTCGGTGCTGCGCGGCCTGGTCAAGCACGCGCTGGAACTCAACAACACCGAACGCCCTGCGCCCGGCCCCGCCA
CCGAACAGGCTGCACGCCTGCTCGGCGCTTCGCCGGCCATGGATGTACTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGTGAATCGGGCGTGGGCAAGGAACTGGTCGCGCGCACCATCCATGCTCAGGGCGCGCG
TGCCGCCGGTCCGTTCATTCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGCGAGTTCTTCGGCCACCGCA
AGGGCAGCTTCAGCGGTGCGCATGCCGACAAGCCCGGCCTGTTCCAGGCCGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCCGAGCTGCCGCTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGTGCGGTCGGTGCGGC
CAACGAAGAGCCGGTGGACGTACGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGACGGGCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAGCTGAAGGTGCCGCCGCTGCGCGAGCGCCGCCAGGACCTGCCGGAA
CTGGCTGCCGCCGTGCTGGCACGCCTGGCCCGCAGCCACGGCCGTGCCACCCCGTTGCTGGCGCCCTCGGCGCTGGAGGC
GCTGGCGCAGTACACCTTCCCCGGCAACGTGCGCGAACTGGAGAACATTCTGGAGCGCGCGCTTGCACTGGCCGAAGAAG
ATCGCATTGGTGCCGACGACCTGCGCCTGCCGCAGCACGCCCCGCGAGCGCCCGGCGGCGCTGCTCCCGCCGAAGCCGTG
GCCGACCTGCAGCCCGGCAGCGCCGCCCTGCCCTCGTACATCGAGCAGCTGGAGCGCAGCGCCATCCAGCGCGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACGGCCGCGCAGCTGGGGATTACCTTCCGCGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.281	99.781	0.621
pilR	Acinetobacter baumannii strain A118	48.164	100	0.488