Detailed information NTG0364382

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FEO95_RS18125
• Genome accession: NZ_CP040432
• Coordinates: 3940220..3941593 (+)
• Length: 457 a.a.
• NCBI ID: WP_006387002.1
• Uniprot ID: B4ST74
• Organism: Stenotrophomonas maltophilia strain sm-RA9
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3935220..3946593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FEO95_RS18110 (FEO95_18215)	sucD	3936104..3936979 (-)	876	WP_012511927.1	succinate--CoA ligase subunit alpha	-
FEO95_RS18115 (FEO95_18220)	sucC	3937000..3938169 (-)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
FEO95_RS18120 (FEO95_18225)	-	3938546..3940159 (+)	1614	WP_032972469.1	ATP-binding protein	-
FEO95_RS18125 (FEO95_18230)	pilR	3940220..3941593 (+)	1374	WP_006387002.1	sigma-54 dependent transcriptional regulator	Regulator
FEO95_RS18130 (FEO95_18235)	pilB	3941826..3943559 (-)	1734	WP_006387090.1	type IV-A pilus assembly ATPase PilB	Machinery gene
FEO95_RS18135 (FEO95_18240)	-	3943904..3944776 (+)	873	WP_006387092.1	glycosyltransferase family 2 protein	-
FEO95_RS18140 (FEO95_18245)	-	3944773..3946002 (+)	1230	WP_154354806.1	glycosyltransferase	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49595.94 Da
• Isoelectric Point: 6.3584

>NTDB_id=364382 FEO95_RS18125 WP_006387002.1 3940220..3941593(+) (pilR) [Stenotrophomonas maltophilia strain sm-RA9]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNAERPQPGPNAEQGARLLGASPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFIPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRPVGAANEEPVDVRILSATHRDLAELVEDGRFRHDLYYRINVIELRVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRVPGGAAPVEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=364382 FEO95_RS18125 WP_006387002.1 3940220..3941593(+) (pilR) [Stenotrophomonas maltophilia strain sm-RA9]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGATGAACGCGACATCCGCGAACTGCTGGTACTGACCCTCGGCCGCAT
GGGGCTGCGTATCAGTACCGCCGCCAACCTGGCCGAAGCGCGCGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGGCTGCCCGATGGCAACGGCATCGAACTGGTCAGCGAGATTGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCCTTCGGCAGCATGGATCTGGCCGTGGAAGCACTGAAGGCCGGTGCCTTCGACTTCGTCAGCAAGCCGGT
GGATATCGCCGTCCTGCGCGGACTGGTCAAGCATGCACTGGAACTCAACAACGCCGAACGCCCGCAGCCCGGGCCCAACG
CCGAACAGGGCGCACGCCTGCTGGGCGCTTCGCCGGCCATGGACGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTGGGTGAGTCCGGCGTTGGCAAGGAACTGGTCGCACGCACCATCCACGCCCAGGGCGCGCG
CGCGGCCGGACCGTTCATTCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAAAGCGAGTTCTTCGGCCATCGCA
AGGGCAGCTTCAGCGGCGCCCATGCCGACAAGCCCGGCCTGTTCCAGGCCGCACACGGCGGCACCCTGTTCCTGGACGAA
GTGGCCGAGCTGCCGCTGCAGATGCAGGTGAAACTGCTGCGCGCGATCCAGGAGAAGTCGGTGCGGCCGGTCGGTGCAGC
CAACGAAGAACCGGTGGACGTGCGCATCCTCTCTGCCACCCACCGCGATCTGGCCGAACTGGTCGAGGACGGGCGTTTCC
GCCACGACCTCTACTACCGCATCAACGTGATCGAACTGAGGGTGCCGCCGCTGCGCGAGCGCCGCCAGGACCTGCCGGAG
CTGGCCGCGGCAGTGCTGGCACGACTGGCCCGCAGCCACGGCCGCGCCACCCCGCTGCTGGCGCCGTCGGCGCTGGAGGC
ACTGGCCCAGTACGCCTTCCCCGGCAACGTGCGCGAACTGGAGAACATTCTGGAACGGGCGCTGGCGCTGGCCGAGGAAG
ACTGCATCGGTGCAGACGACCTGCGCCTGCCGCAGCATGCTCCGCGCGTCCCCGGCGGTGCCGCTCCTGTCGAAGCCGTG
GCCGACCTGCAGCCCGGCAGCGCCGCCCTGCCCTCGTACATCGAGCAACTGGAGCGCAGCGCCATCCAGCGCGCGCTGGA
AGAGAACCGTTGGAACAAGACCCGTACCGCCGCGCAGCTGGGCATCACCTTCCGTGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

3D structure

• AlphaFold DB: B4ST74

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.061	99.781	0.619
pilR	Acinetobacter baumannii strain A118	47.619	100	0.481