Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FD735_RS01815 Genome accession   NZ_CP040231
Coordinates   323144..324193 (+) Length   349 a.a.
NCBI ID   WP_139658350.1    Uniprot ID   A0A5B7Y4B7
Organism   Streptococcus sp. 1643     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 318144..329193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS01790 (FD735_01790) - 319279..319911 (+) 633 WP_139658349.1 DJ-1/PfpI family protein -
  FD735_RS01795 (FD735_01795) dnaJ 320063..321199 (+) 1137 WP_001066307.1 molecular chaperone DnaJ -
  FD735_RS01800 (FD735_01800) - 321641..321928 (-) 288 WP_044020273.1 hypothetical protein -
  FD735_RS01805 (FD735_01805) - 321938..322348 (-) 411 WP_001278307.1 HIT family protein -
  FD735_RS01810 (FD735_01810) pptA 322416..323147 (+) 732 WP_061587523.1 ABC transporter ATP-binding protein Regulator
  FD735_RS01815 (FD735_01815) pptB 323144..324193 (+) 1050 WP_139658350.1 ABC transporter permease Regulator
  FD735_RS01820 (FD735_01820) ccrZ 324241..325035 (+) 795 WP_000363019.1 cell cycle regulator CcrZ -
  FD735_RS01825 (FD735_01825) trmB 325032..325667 (+) 636 WP_001266088.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FD735_RS01830 (FD735_01830) rimP 325794..326273 (+) 480 WP_000338692.1 ribosome maturation factor RimP -
  FD735_RS01835 (FD735_01835) nusA 326316..327452 (+) 1137 WP_000032278.1 transcription termination factor NusA -
  FD735_RS01840 (FD735_01840) rnpM 327474..327767 (+) 294 WP_000857560.1 RNase P modulator RnpM -
  FD735_RS01845 (FD735_01845) - 327760..328059 (+) 300 WP_001041396.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 40261.17 Da        Isoelectric Point: 9.8014

>NTDB_id=362632 FD735_RS01815 WP_139658350.1 323144..324193(+) (pptB) [Streptococcus sp. 1643]
MKDLFLKREQAFRKECVGYLRYVLNDHFVLFLLVLIGFLAYQYSQLLQHFPENHWPILLFLGIVSALLLAWGGIATYMEG
PDKLFLLVSEEEVKSHLKGQTVRSLVFWLLVQTLFLLLFAPLFLAMGYGLPVFLIYVLLLGAGKYLLFRQKASKFFTENG
IDWDYVIAQESKRKQALLRFFALFTQVKGVSNSVKRRAYLDFILKAVQKVPSKIWQNLYLRSYLRNGDLFALSLRLLFLS
LLAVIFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLEKGEKEKGLKQIVLGVGSAVLLLELLVGAVVFQE
KIALLALVGASLFLQLFYLPYQLKRLVDE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=362632 FD735_RS01815 WP_139658350.1 323144..324193(+) (pptB) [Streptococcus sp. 1643]
ATGAAAGACTTGTTTTTAAAGCGAGAGCAGGCTTTTCGTAAGGAGTGTGTCGGTTATCTGCGTTATGTTCTCAATGATCA
CTTTGTCTTGTTCCTGCTAGTTCTTATCGGTTTTCTAGCTTACCAGTACAGCCAACTCCTGCAACATTTTCCTGAAAATC
ATTGGCCTATCCTCTTGTTTTTAGGGATTGTATCTGCCTTGCTTTTAGCTTGGGGAGGAATCGCAACCTACATGGAAGGG
CCTGACAAGCTCTTTCTCTTAGTCAGTGAAGAGGAGGTTAAGTCCCACCTCAAAGGGCAGACAGTGCGCTCACTGGTCTT
TTGGCTCTTGGTCCAAACCCTTTTCTTGCTTTTATTTGCGCCCTTATTTTTAGCCATGGGTTATGGCTTGCCAGTTTTTC
TCATCTATGTGCTTTTATTGGGAGCTGGGAAATATCTCCTCTTTCGTCAAAAAGCCAGTAAATTTTTTACTGAGAACGGA
ATTGACTGGGACTATGTGATCGCCCAAGAAAGCAAGCGCAAGCAAGCTTTGCTTCGTTTCTTTGCTCTCTTTACTCAGGT
TAAGGGCGTTTCAAATAGTGTCAAACGTCGCGCTTATCTGGATTTCATCCTTAAAGCAGTTCAGAAGGTGCCGAGCAAGA
TTTGGCAAAATCTCTATCTTCGTTCTTACTTGCGAAATGGAGACCTCTTTGCCCTCAGTCTCCGCCTCCTCTTCCTATCC
TTGTTAGCTGTGATCTTTATCGAGCAAGCTTGGATCGCGACAGCAGTGGTAGTGCTGTTTAACTACCTCTTGCTCTTTCA
GTTACTGGCCCTCTATCATGCCTTTGACTACCAGTACTTGACTCAGCTCTTTCCACTAGAAAAAGGGGAGAAAGAGAAGG
GATTGAAACAGATTGTGCTTGGTGTGGGAAGTGCAGTTCTTTTGCTGGAATTGCTGGTCGGAGCAGTGGTTTTTCAAGAA
AAAATAGCCTTGTTGGCTCTTGTAGGGGCTAGTCTCTTCCTACAATTGTTTTATTTGCCTTACCAACTAAAAAGATTGGT
TGACGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5B7Y4B7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

48

100

0.481

  pptB Streptococcus thermophilus LMD-9

47.143

100

0.473


Multiple sequence alignment