Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FD735_RS01810 Genome accession   NZ_CP040231
Coordinates   322416..323147 (+) Length   243 a.a.
NCBI ID   WP_061587523.1    Uniprot ID   -
Organism   Streptococcus sp. 1643     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 317416..328147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS01790 (FD735_01790) - 319279..319911 (+) 633 WP_139658349.1 DJ-1/PfpI family protein -
  FD735_RS01795 (FD735_01795) dnaJ 320063..321199 (+) 1137 WP_001066307.1 molecular chaperone DnaJ -
  FD735_RS01800 (FD735_01800) - 321641..321928 (-) 288 WP_044020273.1 hypothetical protein -
  FD735_RS01805 (FD735_01805) - 321938..322348 (-) 411 WP_001278307.1 HIT family protein -
  FD735_RS01810 (FD735_01810) pptA 322416..323147 (+) 732 WP_061587523.1 ABC transporter ATP-binding protein Regulator
  FD735_RS01815 (FD735_01815) pptB 323144..324193 (+) 1050 WP_139658350.1 ABC transporter permease Regulator
  FD735_RS01820 (FD735_01820) ccrZ 324241..325035 (+) 795 WP_000363019.1 cell cycle regulator CcrZ -
  FD735_RS01825 (FD735_01825) trmB 325032..325667 (+) 636 WP_001266088.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FD735_RS01830 (FD735_01830) rimP 325794..326273 (+) 480 WP_000338692.1 ribosome maturation factor RimP -
  FD735_RS01835 (FD735_01835) nusA 326316..327452 (+) 1137 WP_000032278.1 transcription termination factor NusA -
  FD735_RS01840 (FD735_01840) rnpM 327474..327767 (+) 294 WP_000857560.1 RNase P modulator RnpM -
  FD735_RS01845 (FD735_01845) - 327760..328059 (+) 300 WP_001041396.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27201.66 Da        Isoelectric Point: 4.7211

>NTDB_id=362631 FD735_RS01810 WP_061587523.1 322416..323147(+) (pptA) [Streptococcus sp. 1643]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVESLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=362631 FD735_RS01810 WP_061587523.1 322416..323147(+) (pptA) [Streptococcus sp. 1643]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCATGTCCCTGTCTTGAAAGATGTGTCCTTTACCGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGGCTCAACGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ACAGTGGGGAAATCAAGATTAACGGTCTCACCCTGCGAGAAGATGCGACCAGCTATCGCAAGCAGATTGGGTATATCCCA
GAAACGCCTAGTCTGTATGAGGAATTGACCCTCAGGGAGCATATTGAGACGGTTGCCATGGCCTATGGTATTGAGCAAAA
AGTGGCTTTTGAGCGAGTAGAATCTTTGTTAAAAATGTTCCGTCTGGACCAAAAATTGGACTGGTTCCCAGTGCATTTTT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCATTTGTGGTAGATCCGAGTCTTTTCATCGTTGATGAGCCTTTT
CTTGGGCTCGATCCGCTGGCGATTGCCGACTTGATTCAGCTTTTGGAAGTAGAAAAGCAAAAAGGCAAGTCCATTCTCAT
GAGTACCCACGTGCTGGATTCAGCGGAGAAGATGTGTGATGCCTTTGTCATCCTCCACAAGGGGGAGGTGCGAGCTCAGG
GGAACCTCCAGCAACTCCGCGAAGCCTTTGACATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment