Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   E3S79_RS03170 Genome accession   NZ_CP047795
Coordinates   668463..669137 (+) Length   224 a.a.
NCBI ID   WP_160192052.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_490     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 663463..674137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S79_RS03145 (E3S79_03145) - 663677..664744 (+) 1068 WP_000980142.1 membrane protein -
  E3S79_RS03150 (E3S79_03150) - 664895..665938 (+) 1044 WP_001030756.1 alpha/beta hydrolase -
  E3S79_RS03155 (E3S79_03155) - 666267..666695 (+) 429 WP_000198504.1 hypothetical protein -
  E3S79_RS03160 (E3S79_03160) - 666906..667412 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  E3S79_RS03165 (E3S79_03165) graX 667525..668447 (+) 923 Protein_615 auxiliary protein GraX/ApsX -
  E3S79_RS03170 (E3S79_03170) braR 668463..669137 (+) 675 WP_160192052.1 response regulator transcription factor GraR/ApsR Regulator
  E3S79_RS03175 (E3S79_03175) graS 669130..670170 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  E3S79_RS03180 (E3S79_03180) vraF 670317..671078 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  E3S79_RS03185 (E3S79_03185) - 671068..672957 (+) 1890 WP_000009403.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26015.82 Da        Isoelectric Point: 4.3963

>NTDB_id=362622 E3S79_RS03170 WP_160192052.1 668463..669137(+) (braR) [Staphylococcus aureus strain UP_490]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKHTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAVETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=362622 E3S79_RS03170 WP_160192052.1 668463..669137(+) (braR) [Staphylococcus aureus strain UP_490]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGCCGAGTGTATGAATTTACTGCTGAAGAAAAACATACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAGTTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402

Multiple sequence alignment