Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FD735_RS01145 Genome accession   NZ_CP040231
Coordinates   200199..201209 (+) Length   336 a.a.
NCBI ID   WP_139658287.1    Uniprot ID   A0A5B7Y3S1
Organism   Streptococcus sp. 1643     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 195199..206209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS01120 (FD735_01120) - 195431..196753 (+) 1323 WP_139658284.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  FD735_RS01125 (FD735_01125) folE 196734..197288 (+) 555 WP_000380916.1 GTP cyclohydrolase I FolE -
  FD735_RS01130 (FD735_01130) folK 197529..198350 (+) 822 WP_139658285.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  FD735_RS01135 (FD735_01135) - 198343..199626 (+) 1284 WP_139658286.1 DUF308 domain-containing protein -
  FD735_RS01140 (FD735_01140) - 199677..199994 (-) 318 WP_000886044.1 DUF960 domain-containing protein -
  FD735_RS01145 (FD735_01145) ccpA 200199..201209 (+) 1011 WP_139658287.1 catabolite control protein A Regulator
  FD735_RS01150 (FD735_01150) - 201263..202225 (-) 963 WP_001124803.1 asparaginase -
  FD735_RS01155 (FD735_01155) - 202291..203676 (+) 1386 WP_139658288.1 Cof-type HAD-IIB family hydrolase -
  FD735_RS01160 (FD735_01160) - 203713..204165 (-) 453 WP_000079161.1 universal stress protein -
  FD735_RS01165 (FD735_01165) - 204332..204631 (+) 300 WP_139658289.1 hypothetical protein -
  FD735_RS01170 (FD735_01170) - 204775..205989 (+) 1215 WP_000666454.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37228.26 Da        Isoelectric Point: 5.5033

>NTDB_id=362622 FD735_RS01145 WP_139658287.1 200199..201209(+) (ccpA) [Streptococcus sp. 1643]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLLKENEKIAFVSGPLVDDINGKVRLIGYKEALKKAGHSYSEGLVFESKYSYDDGYALAERLISSQ
ATAAVVTGDELAAGVLNGLADHGISVPEEFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=362622 FD735_RS01145 WP_139658287.1 200199..201209(+) (ccpA) [Streptococcus sp. 1643]
ATGAACACAGATGATACAGTAACGATTTATGACGTCGCCCGTGAAGCAGGAGTTTCAATGGCAACAGTTAGCCGTGTCGT
TAATGGCAACAAGAATGTTAAAGAGAACACTCGAAAAAAAGTCCTAGAAGTGATTGATCGCTTGGACTATCGTCCAAATG
CGGTAGCCCGTGGTTTAGCTAGCAAGAAAACAACGACAGTCGGAGTTGTGATTCCTAACATTACCAATGGTTATTTCTCA
ACGCTTGCTAAGGGGATTGACGACATTGCTGAAATGTACAAGTATAACATTGTCCTAGCGAATAGTGATGAGGATGATGA
AAAGGAAGTTTCAGTGGTCAACACTCTCTTTTCAAAACAAGTTGATGGGATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAGTTTTCTCGTTCACGGACACCGGTTGTTCTTGCTGGTACTGTGGATGTAGAACACCAACTTCCAAGT
GTAAATATCGACTACAAACAAGCAACGATTGATGCCGTGAGCTACCTTCTCAAAGAAAACGAAAAGATTGCTTTTGTTAG
TGGACCACTTGTTGATGATATCAATGGCAAGGTTCGTTTGATTGGTTACAAGGAAGCCTTGAAAAAAGCTGGACATTCTT
ATAGCGAGGGATTGGTCTTTGAATCAAAATACAGCTATGATGATGGTTATGCCTTGGCAGAACGCTTGATTTCATCACAA
GCTACAGCCGCAGTTGTAACAGGTGATGAATTGGCAGCAGGTGTCCTAAATGGTTTAGCTGACCATGGTATATCTGTGCC
AGAAGAGTTTGAAATCATTACGACAGATGACTCTCAAATTGCACGATTCACTCGTCCAAACTTGACGACTATTGCCCAAC
CTCTTTATGACTTAGGTGCTATCAGCATGCGTATGTTGACTAAGATTATGCATAAGGAAGAATTGGAAGAACGTGAAGTT
CTCCTACCTCATGGTTTGACAGAACGCCGCTCTACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5B7Y3S1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.048

100

0.94

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.323

99.405

0.878

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

98.512

0.565


Multiple sequence alignment