Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | FDN00_RS04505 | Genome accession | NZ_CP040084 |
| Coordinates | 952946..953356 (+) | Length | 136 a.a. |
| NCBI ID | WP_002017231.1 | Uniprot ID | N9KEH5 |
| Organism | Acinetobacter baumannii strain VB33071 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 947946..958356
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDN00_RS04490 (FDN00_04490) | - | 948935..951241 (+) | 2307 | WP_000259109.1 | RelA/SpoT family protein | - |
| FDN00_RS04495 (FDN00_04495) | - | 951286..952059 (-) | 774 | WP_000682841.1 | SDR family oxidoreductase | - |
| FDN00_RS04500 (FDN00_04500) | mazG | 952171..952977 (+) | 807 | WP_000359483.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| FDN00_RS04505 (FDN00_04505) | comEA | 952946..953356 (+) | 411 | WP_002017231.1 | ComEA family DNA-binding protein | Machinery gene |
| FDN00_RS04510 (FDN00_04510) | pcnB | 953481..954944 (+) | 1464 | WP_001194207.1 | polynucleotide adenylyltransferase PcnB | - |
| FDN00_RS04515 (FDN00_04515) | folK | 954941..955423 (+) | 483 | WP_000219213.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| FDN00_RS04520 (FDN00_04520) | panB | 955469..956278 (+) | 810 | WP_000624763.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| FDN00_RS04525 (FDN00_04525) | panC | 956282..957130 (+) | 849 | WP_000846362.1 | pantoate--beta-alanine ligase | - |
| FDN00_RS04530 (FDN00_04530) | rapZ | 957153..958004 (+) | 852 | WP_000821671.1 | RNase adapter RapZ | - |
| FDN00_RS04535 (FDN00_04535) | - | 958001..958270 (+) | 270 | WP_000567533.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 15654.89 Da Isoelectric Point: 10.3828
>NTDB_id=361954 FDN00_RS04505 WP_002017231.1 952946..953356(+) (comEA) [Acinetobacter baumannii strain VB33071]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
Nucleotide
Download Length: 411 bp
>NTDB_id=361954 FDN00_RS04505 WP_002017231.1 952946..953356(+) (comEA) [Acinetobacter baumannii strain VB33071]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii strain A118 |
97.794 |
100 |
0.978 |
| comEA | Acinetobacter baumannii D1279779 |
95.588 |
100 |
0.956 |
| comEA | Acinetobacter baylyi ADP1 |
42.748 |
96.324 |
0.412 |