Detailed information NTG0036184

Bioinformatically predicted

Overview

• Name: comFA/cflA
• Type: Machinery gene
• Locus tag: GALLO_RS02765
• Genome accession: NC_013798
• Coordinates: 526021..527235 (+)
• Length: 404 a.a.
• NCBI ID: WP_012961542.1
• Uniprot ID: A0AA36NQ60
• Organism: Streptococcus gallolyticus UCN34
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 521021..532235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GALLO_RS02740 (GALLO_0497)	-	521672..522316 (+)	645	WP_009853571.1	response regulator transcription factor	-
GALLO_RS02745 (GALLO_0498)	-	522435..523835 (+)	1401	WP_012961539.1	Cof-type HAD-IIB family hydrolase	-
GALLO_RS02750 (GALLO_0499)	-	523835..524191 (+)	357	WP_003063541.1	S1 RNA-binding domain-containing protein	-
GALLO_RS02755 (GALLO_0500)	cysK	524305..525234 (-)	930	WP_012961540.1	cysteine synthase A	-
GALLO_RS02760 (GALLO_0501)	-	525338..525964 (-)	627	WP_012961541.1	YigZ family protein	-
GALLO_RS02765 (GALLO_0502)	comFA/cflA	526021..527235 (+)	1215	WP_012961542.1	DEAD/DEAH box helicase	Machinery gene
GALLO_RS02770 (GALLO_0503)	comFC/cflB	527232..527894 (+)	663	WP_012961543.1	ComF family protein	Machinery gene
GALLO_RS02775 (GALLO_0504)	hpf	527970..528518 (+)	549	WP_012961544.1	ribosome hibernation-promoting factor, HPF/YfiA family	-

Sequence

Protein

• Length: 404 a.a.
• Molecular weight: 45861.40 Da
• Isoelectric Point: 10.0654

>NTDB_id=36184 GALLO_RS02765 WP_012961542.1 526021..527235(+) (comFA/cflA) [Streptococcus gallolyticus UCN34]
MDKLDNYYGRLFTQAQLSDALKKQAKQLPAMTKLNHHYVCNRCGSQVSLQNKLQTNVFYCRNCLVFGRNTSNGHLYYFPQ
KRFSKKDSLIWKGKLTPYQDDVSKGMLEGIDAKKDLLIHAVTGAGKTEMIYQSVSKIIDDGVLHGDSEPYKRAPLIIATT
HQLLKFYQAFDLLIIDEVDAFPFVDNAVLYHAVDKAIKPNGTKIFLTATSTDELDKKVKTGTLTKLHLARRFHANPLVVP
QKIWLSGVLSNMQKKKIPQKLINLLKKQRQTCYPLLIFFPNIEQGEAFTQILQTYFPEEQIAFVSSKTENRLEIVEKFRK
QELSILVTTTILERGVTFPCVDVFVVLANHRLYTKSALVQISGRVGRAAERPTGELLFLHDGSTKEMRKAIAEIKAMNKK
GGFA

Nucleotide

• Length: 1215 bp

>NTDB_id=36184 GALLO_RS02765 WP_012961542.1 526021..527235(+) (comFA/cflA) [Streptococcus gallolyticus UCN34]
ATGGATAAACTGGATAATTATTATGGAAGACTATTTACACAAGCTCAACTTTCGGATGCCTTAAAAAAGCAGGCTAAACA
GTTGCCAGCAATGACAAAATTAAATCATCATTATGTTTGCAATCGTTGTGGTAGTCAAGTGTCTTTACAAAATAAACTTC
AAACAAACGTTTTTTATTGTCGAAATTGCCTTGTTTTTGGAAGAAATACGAGTAATGGACATCTCTATTATTTTCCACAA
AAACGTTTTTCTAAAAAAGATTCTCTTATTTGGAAAGGAAAATTGACTCCTTACCAAGATGACGTTTCAAAAGGGATGTT
AGAAGGCATTGATGCTAAGAAAGACCTACTTATTCATGCTGTTACAGGTGCTGGAAAAACAGAAATGATTTACCAATCTG
TATCCAAAATAATCGATGACGGTGTGCTTCATGGAGATTCTGAGCCCTACAAACGTGCCCCTTTAATCATTGCCACAACA
CATCAACTTTTAAAATTTTACCAAGCTTTTGATTTGTTAATTATTGATGAAGTTGATGCCTTTCCATTTGTGGATAATGC
TGTGCTTTACCATGCTGTTGATAAAGCTATCAAACCTAATGGAACCAAGATTTTTTTAACAGCGACATCAACAGATGAAT
TAGATAAAAAAGTAAAAACAGGAACTCTGACCAAATTGCACCTTGCTCGACGCTTTCATGCCAATCCATTAGTTGTGCCA
CAAAAAATCTGGTTGTCTGGCGTTTTATCCAATATGCAAAAGAAGAAAATTCCCCAGAAATTAATAAATCTTCTAAAAAA
ACAACGTCAAACCTGCTATCCTTTGCTAATTTTCTTCCCAAATATCGAACAAGGAGAAGCCTTTACTCAAATTTTACAAA
CTTACTTTCCAGAAGAACAAATCGCTTTTGTGTCTAGTAAAACAGAAAATCGCTTAGAAATTGTAGAAAAATTTAGGAAA
CAAGAACTTTCTATTTTGGTAACAACAACCATTTTAGAACGTGGTGTCACTTTCCCATGCGTAGATGTTTTTGTAGTGCT
TGCCAATCATAGATTATACACCAAAAGCGCGCTAGTTCAGATTTCAGGGCGAGTTGGGAGAGCAGCAGAGCGTCCAACAG
GAGAACTGTTATTCTTGCATGACGGTAGCACTAAAGAAATGAGAAAAGCTATTGCTGAAATTAAAGCGATGAATAAAAAA
GGAGGATTTGCATGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (258-368)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA/cflA	Streptococcus mitis NCTC 12261	54.567	100	0.577
comFA/cflA	Streptococcus pneumoniae Rx1	54.567	100	0.577
comFA/cflA	Streptococcus pneumoniae D39	54.567	100	0.577
comFA/cflA	Streptococcus pneumoniae R6	54.567	100	0.577
comFA/cflA	Streptococcus pneumoniae TIGR4	54.567	100	0.577
comFA/cflA	Streptococcus mitis SK321	53.864	100	0.569
comFA	Lactococcus lactis subsp. cremoris KW2	45.588	100	0.46
comFA	Latilactobacillus sakei subsp. sakei 23K	34.483	100	0.371