Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GALLO_RS00665 | Genome accession | NC_013798 |
| Coordinates | 104576..105532 (+) | Length | 318 a.a. |
| NCBI ID | WP_009853236.1 | Uniprot ID | A0A139R3Z2 |
| Organism | Streptococcus gallolyticus UCN34 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 99576..110532
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GALLO_RS00625 (GALLO_0086) | - | 100494..100862 (+) | 369 | WP_009853228.1 | DUF1033 family protein | - |
| GALLO_RS00630 (GALLO_0087) | comYA | 100933..101874 (+) | 942 | WP_012961327.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GALLO_RS00635 (GALLO_0088) | comYB | 101756..102841 (+) | 1086 | WP_012961328.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GALLO_RS00640 (GALLO_0089) | comYC | 102841..103134 (+) | 294 | WP_009853231.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GALLO_RS00645 (GALLO_0090) | comYD | 103118..103549 (+) | 432 | WP_009853232.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GALLO_RS00650 (GALLO_0091) | comGE | 103503..103796 (+) | 294 | WP_012961329.1 | competence type IV pilus minor pilin ComGE | - |
| GALLO_RS00655 (GALLO_0092) | comYF | 103750..104217 (+) | 468 | WP_012961330.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GALLO_RS00660 (GALLO_0093) | comYG | 104189..104503 (+) | 315 | WP_009853235.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| GALLO_RS00665 (GALLO_0094) | comYH | 104576..105532 (+) | 957 | WP_009853236.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GALLO_RS00670 (GALLO_0095) | - | 105585..106784 (+) | 1200 | WP_012961331.1 | acetate kinase | - |
| GALLO_RS00675 (GALLO_0096) | - | 106946..107146 (+) | 201 | WP_012961332.1 | helix-turn-helix transcriptional regulator | - |
| GALLO_RS00680 (GALLO_0097) | - | 107156..107365 (+) | 210 | WP_009853239.1 | hypothetical protein | - |
| GALLO_RS00685 (GALLO_0098) | - | 107378..107830 (+) | 453 | WP_009853240.1 | hypothetical protein | - |
| GALLO_RS00690 (GALLO_0099) | - | 107842..108480 (+) | 639 | WP_009853241.1 | CPBP family intramembrane glutamic endopeptidase | - |
| GALLO_RS00695 (GALLO_0100) | proC | 108540..109310 (-) | 771 | WP_009853242.1 | pyrroline-5-carboxylate reductase | - |
| GALLO_RS00700 (GALLO_0101) | pepA | 109371..110438 (-) | 1068 | WP_009853243.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 36027.96 Da Isoelectric Point: 4.4127
>NTDB_id=36171 GALLO_RS00665 WP_009853236.1 104576..105532(+) (comYH) [Streptococcus gallolyticus UCN34]
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTLLNNSSKELNYLGIEVDDLLIDLSASIAEVMDSD
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDDIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNAANAKSIFVLKKQAAHTPETFVYPLSDLQSREALTDFIRKFQKWKVDNMNF
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTLLNNSSKELNYLGIEVDDLLIDLSASIAEVMDSD
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDDIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNAANAKSIFVLKKQAAHTPETFVYPLSDLQSREALTDFIRKFQKWKVDNMNF
Nucleotide
Download Length: 957 bp
>NTDB_id=36171 GALLO_RS00665 WP_009853236.1 104576..105532(+) (comYH) [Streptococcus gallolyticus UCN34]
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAATTCTTTTTACTTGGGGGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AGAAACTGCGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATCAAAGCTGGTCAAACA
GAGCAGCTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGATCTTTTAGAAATTGGTAGTGGGACAGGAAACCTTGCTCAAACATTGTTAAACAATTCGTCTAAAG
AATTAAATTATCTTGGGATTGAAGTTGACGATTTATTGATTGATTTATCAGCAAGTATTGCAGAAGTGATGGATTCTGAT
GCTCAGTTTATTCAAGAAGATGCTGTGCGTCCACAAATTCTGAAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTTGG
TTTTTATCCTAATGATGACATTGCCAAACGTTATAAAGTGGCAAGTTCTGATGAGCATACCTATGCCCACCATTTGTTAA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCCGTCAGTCTTTTGACAAGTAAGCAA
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACCTTGCCAGAATCTATTTTTGGTAA
TGCAGCGAATGCAAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGCATACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAGCTCTGACTGATTTCATTAGAAAATTTCAAAAATGGAAAGTTGATAATATGAATTTTTAA
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAATTCTTTTTACTTGGGGGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AGAAACTGCGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATCAAAGCTGGTCAAACA
GAGCAGCTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGATCTTTTAGAAATTGGTAGTGGGACAGGAAACCTTGCTCAAACATTGTTAAACAATTCGTCTAAAG
AATTAAATTATCTTGGGATTGAAGTTGACGATTTATTGATTGATTTATCAGCAAGTATTGCAGAAGTGATGGATTCTGAT
GCTCAGTTTATTCAAGAAGATGCTGTGCGTCCACAAATTCTGAAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTTGG
TTTTTATCCTAATGATGACATTGCCAAACGTTATAAAGTGGCAAGTTCTGATGAGCATACCTATGCCCACCATTTGTTAA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCCGTCAGTCTTTTGACAAGTAAGCAA
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACCTTGCCAGAATCTATTTTTGGTAA
TGCAGCGAATGCAAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGCATACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAGCTCTGACTGATTTCATTAGAAAATTTCAAAAATGGAAAGTTGATAATATGAATTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.987 |
99.371 |
0.686 |
| comYH | Streptococcus mutans UA159 |
68.671 |
99.371 |
0.682 |